Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Nup35Q8R4R6 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Gm26273-201ENSMUST00000104180 131 ntBASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Gm25919-201ENSMUST00000104271 132 ntBASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Gm12173-201ENSMUST00000117622 273 ntBASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Gm13155-201ENSMUST00000119277 646 ntBASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Gm13808-201ENSMUST00000121353 184 ntBASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Gm8178-201ENSMUST00000121570 646 ntBASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Gm7618-201ENSMUST00000121643 171 ntBASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Gm25669-201ENSMUST00000157699 112 ntBASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Gm26460-201ENSMUST00000175061 126 ntBASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Gm27805-201ENSMUST00000184513 79 ntBASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Gm28396-201ENSMUST00000190309 379 ntBASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Gm44773-201ENSMUST00000207374 557 ntBASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Gm3690-201ENSMUST00000211341 262 ntBASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
Nup35Q8R4R6 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC3.22□□□□□ -1.89
Nup35Q8R4R6 CU024892.1-201ENSMUST00000224869 515 ntBASIC3.22□□□□□ -1.89
Nup35Q8R4R6 AC131745.2-201ENSMUST00000225736 565 ntBASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Nup35Q8R4R6 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Nup35Q8R4R6 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Nup35Q8R4R6 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
Nup35Q8R4R6 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.21□□□□□ -1.89
Nup35Q8R4R6 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
Nup35Q8R4R6 AC163296.2-201ENSMUST00000220177 1315 ntBASIC3.21□□□□□ -1.89
Nup35Q8R4R6 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Gm42991-201ENSMUST00000196468 3837 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Gm23697-201ENSMUST00000103897 110 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Gm24117-201ENSMUST00000103973 133 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Gm23879-201ENSMUST00000116874 126 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Gm11923-201ENSMUST00000118135 508 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Gm6565-201ENSMUST00000121217 438 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Gm23789-201ENSMUST00000122536 301 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Gm25342-201ENSMUST00000157459 122 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Gm23499-201ENSMUST00000157736 268 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Gm24939-201ENSMUST00000158325 137 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Mir5103-201ENSMUST00000175111 79 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Gm29320-201ENSMUST00000185235 615 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Gm29179-202ENSMUST00000186138 615 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Gm29448-201ENSMUST00000186675 615 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Gm29314-201ENSMUST00000186800 615 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Gm28253-202ENSMUST00000187971 615 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Gm29169-201ENSMUST00000189835 615 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Gm37241-201ENSMUST00000191736 523 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Gm37501-201ENSMUST00000192830 691 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Gm44607-201ENSMUST00000205611 1090 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Gm45081-201ENSMUST00000206281 572 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Nup35Q8R4R6 AC159244.1-201ENSMUST00000220964 594 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC3.21□□□□□ -1.9
Nup35Q8R4R6 AC211878.2-201ENSMUST00000222486 488 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 AC154592.1-201ENSMUST00000225784 574 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Snord21-201ENSMUST00000082519 94 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Snora31-201ENSMUST00000083213 130 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Gm22868-201ENSMUST00000083955 164 ntBASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Nup35Q8R4R6 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
Nup35Q8R4R6 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Nup35Q8R4R6 AC131720.1-201ENSMUST00000218629 2132 ntBASIC3.2□□□□□ -1.9
Nup35Q8R4R6 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Nup35Q8R4R6 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC3.2□□□□□ -1.9
Nup35Q8R4R6 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Nup35Q8R4R6 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Nup35Q8R4R6 Gm37916-201ENSMUST00000192153 2435 ntBASIC3.2□□□□□ -1.9
Nup35Q8R4R6 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Nup35Q8R4R6 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms