Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm14806-201ENSMUST00000116606 2110 ntBASIC5.05□□□□□ -1.6
CopaQ8CIE6 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CopaQ8CIE6 Gm10471-201ENSMUST00000094946 2967 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CopaQ8CIE6 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CopaQ8CIE6 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CopaQ8CIE6 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CopaQ8CIE6 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC5.04□□□□□ -1.6
CopaQ8CIE6 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CopaQ8CIE6 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CopaQ8CIE6 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CopaQ8CIE6 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CopaQ8CIE6 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CopaQ8CIE6 Gm7485-201ENSMUST00000119502 1109 ntBASIC5.04□□□□□ -1.6
CopaQ8CIE6 Gm13213-201ENSMUST00000119668 474 ntBASIC5.04□□□□□ -1.6
CopaQ8CIE6 Gm12704-201ENSMUST00000119789 464 ntBASIC5.04□□□□□ -1.6
CopaQ8CIE6 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC5.04□□□□□ -1.6
CopaQ8CIE6 n-R5s61-201ENSMUST00000122711 118 ntBASIC5.04□□□□□ -1.6
CopaQ8CIE6 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CopaQ8CIE6 Gm25979-201ENSMUST00000157177 138 ntBASIC5.04□□□□□ -1.6
CopaQ8CIE6 Gm26404-201ENSMUST00000158498 109 ntBASIC5.04□□□□□ -1.6
CopaQ8CIE6 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CopaQ8CIE6 Gm9890-201ENSMUST00000171867 537 ntBASIC5.04□□□□□ -1.6
CopaQ8CIE6 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC5.04□□□□□ -1.6
CopaQ8CIE6 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC5.04□□□□□ -1.6
CopaQ8CIE6 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC5.04□□□□□ -1.6
CopaQ8CIE6 Gm21894-201ENSMUST00000179631 546 ntBASIC5.04□□□□□ -1.6
CopaQ8CIE6 Gm26915-201ENSMUST00000183080 748 ntBASIC5.04□□□□□ -1.6
CopaQ8CIE6 Gm27688-201ENSMUST00000183634 91 ntBASIC5.04□□□□□ -1.6
CopaQ8CIE6 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC5.04□□□□□ -1.6
CopaQ8CIE6 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.04□□□□□ -1.6
CopaQ8CIE6 Gm27755-201ENSMUST00000184623 132 ntBASIC5.04□□□□□ -1.6
CopaQ8CIE6 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CopaQ8CIE6 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CopaQ8CIE6 Gm36382-201ENSMUST00000198892 541 ntBASIC5.04□□□□□ -1.6
CopaQ8CIE6 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC5.04□□□□□ -1.6
CopaQ8CIE6 Gm5339-201ENSMUST00000210551 1102 ntBASIC5.04□□□□□ -1.6
CopaQ8CIE6 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CopaQ8CIE6 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
CopaQ8CIE6 Gm40392-201ENSMUST00000220656 562 ntTSL 5 BASIC5.04□□□□□ -1.6
CopaQ8CIE6 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CopaQ8CIE6 Gm2645-201ENSMUST00000223516 547 ntBASIC5.04□□□□□ -1.6
CopaQ8CIE6 AC167669.3-201ENSMUST00000224720 393 ntBASIC5.04□□□□□ -1.6
CopaQ8CIE6 AC154727.1-201ENSMUST00000226537 499 ntBASIC5.04□□□□□ -1.6
CopaQ8CIE6 AC121978.1-201ENSMUST00000228357 380 ntBASIC5.04□□□□□ -1.6
CopaQ8CIE6 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CopaQ8CIE6 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.04□□□□□ -1.6
CopaQ8CIE6 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CopaQ8CIE6 Gm44587-201ENSMUST00000207399 1685 ntBASIC5.04□□□□□ -1.6
CopaQ8CIE6 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
CopaQ8CIE6 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
CopaQ8CIE6 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CopaQ8CIE6 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CopaQ8CIE6 Gm42534-201ENSMUST00000196063 1754 ntBASIC5.04□□□□□ -1.6
CopaQ8CIE6 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CopaQ8CIE6 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CopaQ8CIE6 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CopaQ8CIE6 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
CopaQ8CIE6 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CopaQ8CIE6 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.03□□□□□ -1.6
CopaQ8CIE6 AC152981.1-201ENSMUST00000218320 2480 ntBASIC5.03□□□□□ -1.6
CopaQ8CIE6 Gm37936-201ENSMUST00000194647 1322 ntBASIC5.03□□□□□ -1.6
CopaQ8CIE6 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
CopaQ8CIE6 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CopaQ8CIE6 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CopaQ8CIE6 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CopaQ8CIE6 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
CopaQ8CIE6 Gm24117-201ENSMUST00000103973 133 ntBASIC5.03□□□□□ -1.6
CopaQ8CIE6 Gm23879-201ENSMUST00000116874 126 ntBASIC5.03□□□□□ -1.6
CopaQ8CIE6 Gm11366-201ENSMUST00000119279 429 ntBASIC5.03□□□□□ -1.6
CopaQ8CIE6 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC5.03□□□□□ -1.6
CopaQ8CIE6 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CopaQ8CIE6 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5.03□□□□□ -1.6
CopaQ8CIE6 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CopaQ8CIE6 Prlr-212ENSMUST00000148257 1190 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CopaQ8CIE6 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC5.03□□□□□ -1.6
CopaQ8CIE6 Gm26153-201ENSMUST00000157433 127 ntBASIC5.03□□□□□ -1.6
CopaQ8CIE6 Gm25655-201ENSMUST00000158465 290 ntBASIC5.03□□□□□ -1.6
CopaQ8CIE6 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CopaQ8CIE6 Gm17377-201ENSMUST00000165184 207 ntBASIC5.03□□□□□ -1.6
CopaQ8CIE6 Gm6632-201ENSMUST00000168425 954 ntBASIC5.03□□□□□ -1.6
CopaQ8CIE6 Spanxn4-201ENSMUST00000172433 424 ntBASIC5.03□□□□□ -1.6
CopaQ8CIE6 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CopaQ8CIE6 Gm18828-202ENSMUST00000181035 310 ntBASIC5.03□□□□□ -1.6
CopaQ8CIE6 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CopaQ8CIE6 Gm3496-201ENSMUST00000188283 745 ntBASIC5.03□□□□□ -1.6
CopaQ8CIE6 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC5.03□□□□□ -1.6
CopaQ8CIE6 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC5.03□□□□□ -1.6
CopaQ8CIE6 Gm43919-201ENSMUST00000204303 364 ntBASIC5.03□□□□□ -1.6
CopaQ8CIE6 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC5.03□□□□□ -1.6
CopaQ8CIE6 Gm8189-203ENSMUST00000211159 1225 ntBASIC5.03□□□□□ -1.6
CopaQ8CIE6 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms