Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Brf1Q8CFK2 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Brf1Q8CFK2 Gm26176-201ENSMUST00000083795 105 ntBASIC5.7□□□□□ -1.5
Brf1Q8CFK2 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Brf1Q8CFK2 Meis1-206ENSMUST00000144988 7553 ntTSL 2 BASIC5.7□□□□□ -1.5
Brf1Q8CFK2 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.7□□□□□ -1.5
Brf1Q8CFK2 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC5.7□□□□□ -1.5
Brf1Q8CFK2 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC5.7□□□□□ -1.5
Brf1Q8CFK2 Gm37762-201ENSMUST00000194515 3561 ntBASIC5.7□□□□□ -1.5
Brf1Q8CFK2 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Gm12225-201ENSMUST00000117995 298 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Gm14906-201ENSMUST00000119265 390 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Gm7421-201ENSMUST00000119298 639 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Mup-ps18-201ENSMUST00000120145 531 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Gm14619-201ENSMUST00000120480 168 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Gm7365-201ENSMUST00000120877 639 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Gm12685-201ENSMUST00000121702 214 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Defa-ps12-201ENSMUST00000122353 193 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Gm24628-201ENSMUST00000122761 289 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Gm26352-201ENSMUST00000158223 125 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Gm25923-201ENSMUST00000158312 138 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Gm26365-201ENSMUST00000179177 94 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Gm26950-201ENSMUST00000182734 498 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Gm4557-201ENSMUST00000185826 907 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Gm18406-201ENSMUST00000185872 669 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Gm18727-201ENSMUST00000185981 553 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Gm4526-201ENSMUST00000186039 920 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Gm29576-201ENSMUST00000188020 678 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Gm8708-201ENSMUST00000188500 906 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Gm28354-201ENSMUST00000190904 678 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Gm44050-201ENSMUST00000204263 527 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Gm29817-201ENSMUST00000210098 172 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 AC091260.1-201ENSMUST00000216112 229 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.69□□□□□ -1.5
Brf1Q8CFK2 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC5.69□□□□□ -1.5
Brf1Q8CFK2 AC116589.4-201ENSMUST00000222390 216 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 AC141884.1-201ENSMUST00000226327 636 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 AC137871.2-201ENSMUST00000226482 289 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Gm24031-201ENSMUST00000083930 131 ntBASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Brf1Q8CFK2 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Brf1Q8CFK2 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Brf1Q8CFK2 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Brf1Q8CFK2 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC5.68□□□□□ -1.5
Brf1Q8CFK2 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Brf1Q8CFK2 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.68□□□□□ -1.5
Brf1Q8CFK2 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Brf1Q8CFK2 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Brf1Q8CFK2 Gm17152-201ENSMUST00000172430 535 ntBASIC5.68□□□□□ -1.5
Brf1Q8CFK2 Mir5128-201ENSMUST00000175217 84 ntBASIC5.68□□□□□ -1.5
Brf1Q8CFK2 Gm20648-201ENSMUST00000175815 328 ntBASIC5.68□□□□□ -1.5
Brf1Q8CFK2 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC5.68□□□□□ -1.5
Brf1Q8CFK2 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC5.68□□□□□ -1.5
Brf1Q8CFK2 Gm8604-201ENSMUST00000183150 965 ntBASIC5.68□□□□□ -1.5
Brf1Q8CFK2 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Brf1Q8CFK2 Gm42720-201ENSMUST00000196813 300 ntBASIC5.68□□□□□ -1.5
Brf1Q8CFK2 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
Brf1Q8CFK2 Gm43810-201ENSMUST00000201018 232 ntBASIC5.68□□□□□ -1.5
Brf1Q8CFK2 Gm7128-201ENSMUST00000211639 533 ntBASIC5.68□□□□□ -1.5
Brf1Q8CFK2 AC158803.3-201ENSMUST00000220024 211 ntBASIC5.68□□□□□ -1.5
Brf1Q8CFK2 AC124569.1-201ENSMUST00000225932 101 ntBASIC5.68□□□□□ -1.5
Brf1Q8CFK2 AC140393.2-201ENSMUST00000226894 943 ntBASIC5.68□□□□□ -1.5
Brf1Q8CFK2 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Brf1Q8CFK2 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Brf1Q8CFK2 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Brf1Q8CFK2 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Brf1Q8CFK2 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Brf1Q8CFK2 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.68□□□□□ -1.5
Brf1Q8CFK2 Gm17131-201ENSMUST00000164420 3846 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms