Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 Gm12638-201ENSMUST00000119531 298 ntBASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 Gm12685-201ENSMUST00000121702 214 ntBASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 n-R5s30-201ENSMUST00000122624 122 ntBASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 Gm23905-201ENSMUST00000157568 109 ntBASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 Gm26085-201ENSMUST00000157900 116 ntBASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 Gm25025-201ENSMUST00000175018 111 ntBASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 Gm21991-201ENSMUST00000180006 508 ntBASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 Mir6921-201ENSMUST00000183719 80 ntBASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 Gm27564-201ENSMUST00000185196 96 ntBASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 Gm42983-201ENSMUST00000199879 815 ntBASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 Gm44887-201ENSMUST00000208980 178 ntBASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 Gm17989-201ENSMUST00000211543 412 ntBASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 AC134537.2-201ENSMUST00000217770 575 ntBASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 AC163621.2-201ENSMUST00000222229 682 ntBASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 Gm37916-201ENSMUST00000192153 2435 ntBASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 Gm37124-201ENSMUST00000192140 1992 ntBASIC4.13□□□□□ -1.75
Ccdc28aQ8CEI3 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 Gm45264-201ENSMUST00000210090 3995 ntBASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 Gm11984-201ENSMUST00000118142 766 ntBASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 Gm25177-201ENSMUST00000122634 117 ntBASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 Gm25553-201ENSMUST00000158076 79 ntBASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 Gm28871-201ENSMUST00000186191 687 ntBASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 AC124524.2-201ENSMUST00000223940 588 ntBASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 AC154634.3-201ENSMUST00000224589 736 ntBASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 AC107369.1-201ENSMUST00000227373 860 ntBASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 Gm23456-201ENSMUST00000083335 137 ntBASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 Mir383-201ENSMUST00000083523 70 ntBASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 Gm7195-201ENSMUST00000190869 1707 ntBASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
Ccdc28aQ8CEI3 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Ccdc28aQ8CEI3 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.11□□□□□ -1.75
Ccdc28aQ8CEI3 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.11□□□□□ -1.75
Ccdc28aQ8CEI3 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Ccdc28aQ8CEI3 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
Ccdc28aQ8CEI3 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Ccdc28aQ8CEI3 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.11□□□□□ -1.75
Ccdc28aQ8CEI3 Snora64-201ENSMUST00000104521 134 ntBASIC4.11□□□□□ -1.75
Ccdc28aQ8CEI3 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC4.11□□□□□ -1.75
Ccdc28aQ8CEI3 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.11□□□□□ -1.75
Ccdc28aQ8CEI3 Gm15785-201ENSMUST00000119145 694 ntBASIC4.11□□□□□ -1.75
Ccdc28aQ8CEI3 Klra14-ps-201ENSMUST00000119532 802 ntBASIC4.11□□□□□ -1.75
Ccdc28aQ8CEI3 Gm15364-201ENSMUST00000119618 585 ntBASIC4.11□□□□□ -1.75
Ccdc28aQ8CEI3 Gm13737-201ENSMUST00000119793 232 ntBASIC4.11□□□□□ -1.75
Ccdc28aQ8CEI3 Llph-ps1-201ENSMUST00000121281 390 ntBASIC4.11□□□□□ -1.75
Ccdc28aQ8CEI3 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Ccdc28aQ8CEI3 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Ccdc28aQ8CEI3 Gm23229-201ENSMUST00000157297 105 ntBASIC4.11□□□□□ -1.75
Ccdc28aQ8CEI3 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC4.11□□□□□ -1.75
Ccdc28aQ8CEI3 Gm22398-201ENSMUST00000174941 125 ntBASIC4.11□□□□□ -1.75
Ccdc28aQ8CEI3 Gm25731-201ENSMUST00000175167 125 ntBASIC4.11□□□□□ -1.75
Ccdc28aQ8CEI3 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Ccdc28aQ8CEI3 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.11□□□□□ -1.75
Ccdc28aQ8CEI3 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC4.11□□□□□ -1.75
Ccdc28aQ8CEI3 Gm27828-201ENSMUST00000184108 119 ntBASIC4.11□□□□□ -1.75
Ccdc28aQ8CEI3 Gm27636-201ENSMUST00000184528 122 ntBASIC4.11□□□□□ -1.75
Ccdc28aQ8CEI3 Gm17777-201ENSMUST00000189740 1276 ntBASIC4.11□□□□□ -1.75
Ccdc28aQ8CEI3 Trbv11-201ENSMUST00000194354 260 ntBASIC4.11□□□□□ -1.75
Ccdc28aQ8CEI3 Gm43651-201ENSMUST00000199796 439 ntBASIC4.11□□□□□ -1.75
Ccdc28aQ8CEI3 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Ccdc28aQ8CEI3 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms