Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm12591-201ENSMUST00000122407 1177 ntBASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 Gm3160-201ENSMUST00000128343 607 ntBASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 Gm16254-201ENSMUST00000131528 730 ntBASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 Gm23819-201ENSMUST00000158744 109 ntBASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 Gm16026-202ENSMUST00000159695 772 ntBASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 Gm16285-201ENSMUST00000162999 347 ntBASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 Gm17043-201ENSMUST00000164621 1283 ntBASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 Gm22857-201ENSMUST00000174969 134 ntBASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 Gm19200-201ENSMUST00000182579 1001 ntBASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 Mir6715-201ENSMUST00000184990 57 ntBASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 Gm42566-201ENSMUST00000197120 643 ntBASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 Gm5660-201ENSMUST00000197453 1149 ntBASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 AC156832.3-201ENSMUST00000215591 435 ntBASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 Gm19233-201ENSMUST00000219772 936 ntBASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 AC158392.1-201ENSMUST00000223720 1069 ntBASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 Gm25005-201ENSMUST00000083812 156 ntBASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 AC124446.1-201ENSMUST00000221027 2644 ntBASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 Gm37764-201ENSMUST00000194664 2150 ntBASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 Gm36927-201ENSMUST00000192504 1841 ntBASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ccdc28bQ8CEG5 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 AC120375.2-201ENSMUST00000226532 1853 ntBASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Gm24067-201ENSMUST00000104514 85 ntBASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Gm13887-201ENSMUST00000119009 344 ntBASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Gm7189-201ENSMUST00000119811 429 ntBASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Gm12587-201ENSMUST00000120180 427 ntBASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Gm12001-201ENSMUST00000121727 913 ntBASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Gm24441-201ENSMUST00000157235 281 ntBASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Gm23231-201ENSMUST00000157299 104 ntBASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Gm26046-201ENSMUST00000157312 166 ntBASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Gm22339-201ENSMUST00000157718 62 ntBASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Gm24002-201ENSMUST00000158456 104 ntBASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Gm16300-201ENSMUST00000160031 1279 ntBASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Gm4617-201ENSMUST00000178993 331 ntBASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Gm5511-201ENSMUST00000189380 802 ntBASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Gm43308-201ENSMUST00000197236 373 ntBASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Gm42625-201ENSMUST00000198611 922 ntBASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Gm45392-201ENSMUST00000210441 214 ntBASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 AC153975.1-201ENSMUST00000220087 926 ntBASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Ccdc28bQ8CEG5 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.28□□□□□ -1.72
Ccdc28bQ8CEG5 Gm42852-201ENSMUST00000202649 1379 ntBASIC4.28□□□□□ -1.72
Ccdc28bQ8CEG5 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc28bQ8CEG5 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.28□□□□□ -1.72
Ccdc28bQ8CEG5 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ccdc28bQ8CEG5 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ccdc28bQ8CEG5 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ccdc28bQ8CEG5 Gm23424-201ENSMUST00000103889 110 ntBASIC4.28□□□□□ -1.72
Ccdc28bQ8CEG5 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC4.28□□□□□ -1.72
Ccdc28bQ8CEG5 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC4.28□□□□□ -1.72
Ccdc28bQ8CEG5 Gm11346-201ENSMUST00000118346 704 ntBASIC4.28□□□□□ -1.72
Ccdc28bQ8CEG5 Gm7421-201ENSMUST00000119298 639 ntBASIC4.28□□□□□ -1.72
Ccdc28bQ8CEG5 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC4.28□□□□□ -1.72
Ccdc28bQ8CEG5 Gm12067-201ENSMUST00000119755 1148 ntBASIC4.28□□□□□ -1.72
Ccdc28bQ8CEG5 Gm11510-201ENSMUST00000120278 347 ntBASIC4.28□□□□□ -1.72
Ccdc28bQ8CEG5 Gm7365-201ENSMUST00000120877 639 ntBASIC4.28□□□□□ -1.72
Ccdc28bQ8CEG5 Gm12998-201ENSMUST00000122445 789 ntBASIC4.28□□□□□ -1.72
Ccdc28bQ8CEG5 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc28bQ8CEG5 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc28bQ8CEG5 Gm16327-201ENSMUST00000137146 228 ntBASIC4.28□□□□□ -1.72
Ccdc28bQ8CEG5 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms