Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Gm43370-201ENSMUST00000196437 284 ntBASIC5.12□□□□□ -1.59
Nup88Q8CEC0 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Gm45710-201ENSMUST00000212847 215 ntBASIC5.12□□□□□ -1.59
Nup88Q8CEC0 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Gm37412-201ENSMUST00000194866 4321 ntBASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Nup88Q8CEC0 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nup88Q8CEC0 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC5.11□□□□□ -1.59
Nup88Q8CEC0 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Nup88Q8CEC0 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Nup88Q8CEC0 AC113059.2-201ENSMUST00000213462 3016 ntBASIC5.11□□□□□ -1.59
Nup88Q8CEC0 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Nup88Q8CEC0 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Nup88Q8CEC0 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Nup88Q8CEC0 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC5.11□□□□□ -1.59
Nup88Q8CEC0 Gm12994-201ENSMUST00000119601 447 ntBASIC5.11□□□□□ -1.59
Nup88Q8CEC0 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
Nup88Q8CEC0 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC5.11□□□□□ -1.59
Nup88Q8CEC0 Gm29513-201ENSMUST00000185741 202 ntBASIC5.11□□□□□ -1.59
Nup88Q8CEC0 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Nup88Q8CEC0 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC5.11□□□□□ -1.59
Nup88Q8CEC0 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC5.11□□□□□ -1.59
Nup88Q8CEC0 Gm43774-201ENSMUST00000196327 878 ntBASIC5.11□□□□□ -1.59
Nup88Q8CEC0 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Nup88Q8CEC0 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Nup88Q8CEC0 Gm43441-201ENSMUST00000201458 205 ntBASIC5.11□□□□□ -1.59
Nup88Q8CEC0 AC154592.1-201ENSMUST00000225784 574 ntBASIC5.11□□□□□ -1.59
Nup88Q8CEC0 AC140209.1-201ENSMUST00000227875 284 ntBASIC5.11□□□□□ -1.59
Nup88Q8CEC0 AC154692.1-201ENSMUST00000228314 544 ntBASIC5.11□□□□□ -1.59
Nup88Q8CEC0 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Nup88Q8CEC0 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Nup88Q8CEC0 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Nup88Q8CEC0 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Nup88Q8CEC0 Olfr876-201ENSMUST00000086064 1048 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Nup88Q8CEC0 Gm45211-201ENSMUST00000206208 2650 ntBASIC5.11□□□□□ -1.59
Nup88Q8CEC0 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Nup88Q8CEC0 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC5.11□□□□□ -1.59
Nup88Q8CEC0 Neat1-201ENSMUST00000173672 20771 ntBASIC5.11□□□□□ -1.59
Nup88Q8CEC0 Gm36931-201ENSMUST00000192997 4801 ntBASIC5.11□□□□□ -1.59
Nup88Q8CEC0 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC5.11□□□□□ -1.59
Nup88Q8CEC0 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Nup88Q8CEC0 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nup88Q8CEC0 Cdh19-201ENSMUST00000094626 3914 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nup88Q8CEC0 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Nup88Q8CEC0 Gm16421-201ENSMUST00000117616 1557 ntBASIC5.1□□□□□ -1.59
Nup88Q8CEC0 Gm15361-201ENSMUST00000119320 444 ntBASIC5.1□□□□□ -1.59
Nup88Q8CEC0 Gm12757-201ENSMUST00000119465 800 ntBASIC5.1□□□□□ -1.59
Nup88Q8CEC0 Gm6062-201ENSMUST00000120462 631 ntBASIC5.1□□□□□ -1.59
Nup88Q8CEC0 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC5.1□□□□□ -1.59
Nup88Q8CEC0 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC5.1□□□□□ -1.59
Nup88Q8CEC0 Gm18560-201ENSMUST00000173463 1123 ntBASIC5.1□□□□□ -1.59
Nup88Q8CEC0 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Nup88Q8CEC0 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC5.1□□□□□ -1.59
Nup88Q8CEC0 Mir6907-201ENSMUST00000183764 71 ntBASIC5.1□□□□□ -1.59
Nup88Q8CEC0 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Nup88Q8CEC0 Gm42876-201ENSMUST00000196989 3215 ntBASIC5.1□□□□□ -1.59
Nup88Q8CEC0 Gm43345-201ENSMUST00000199484 269 ntBASIC5.1□□□□□ -1.59
Nup88Q8CEC0 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC5.1□□□□□ -1.59
Nup88Q8CEC0 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Nup88Q8CEC0 Gm45392-201ENSMUST00000210441 214 ntBASIC5.1□□□□□ -1.59
Nup88Q8CEC0 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Nup88Q8CEC0 AC140930.4-201ENSMUST00000220750 150 ntBASIC5.1□□□□□ -1.59
Nup88Q8CEC0 Diaph3-206ENSMUST00000226745 713 ntBASIC5.1□□□□□ -1.59
Nup88Q8CEC0 AC149294.7-201ENSMUST00000227475 1432 ntBASIC5.1□□□□□ -1.59
Nup88Q8CEC0 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Nup88Q8CEC0 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Nup88Q8CEC0 Gm25799-201ENSMUST00000082643 107 ntBASIC5.1□□□□□ -1.59
Nup88Q8CEC0 Gm23510-201ENSMUST00000083083 163 ntBASIC5.1□□□□□ -1.59
Nup88Q8CEC0 Gm24319-201ENSMUST00000083389 107 ntBASIC5.1□□□□□ -1.59
Nup88Q8CEC0 Gm22444-201ENSMUST00000093693 108 ntBASIC5.1□□□□□ -1.59
Nup88Q8CEC0 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Nup88Q8CEC0 Gm44434-201ENSMUST00000203918 3745 ntBASIC5.1□□□□□ -1.59
Nup88Q8CEC0 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Nup88Q8CEC0 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC5.1□□□□□ -1.59
Nup88Q8CEC0 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Nup88Q8CEC0 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Nup88Q8CEC0 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Nup88Q8CEC0 Gm26522-201ENSMUST00000181565 1555 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Nup88Q8CEC0 Gm43059-201ENSMUST00000202437 1388 ntBASIC5.09□□□□□ -1.59
Nup88Q8CEC0 Gm26996-201ENSMUST00000204418 1359 ntBASIC5.09□□□□□ -1.59
Nup88Q8CEC0 Gm14714-201ENSMUST00000119743 439 ntBASIC5.09□□□□□ -1.59
Nup88Q8CEC0 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Nup88Q8CEC0 Gm25264-201ENSMUST00000158519 117 ntBASIC5.09□□□□□ -1.59
Nup88Q8CEC0 Gm24224-201ENSMUST00000158828 258 ntBASIC5.09□□□□□ -1.59
Nup88Q8CEC0 Gm16300-201ENSMUST00000160031 1279 ntBASIC5.09□□□□□ -1.59
Nup88Q8CEC0 Gm16558-201ENSMUST00000163015 532 ntBASIC5.09□□□□□ -1.59
Nup88Q8CEC0 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC5.09□□□□□ -1.59
Nup88Q8CEC0 Mir1264-201ENSMUST00000175381 86 ntBASIC5.09□□□□□ -1.59
Nup88Q8CEC0 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC5.09□□□□□ -1.59
Nup88Q8CEC0 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms