Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.09□□□□□ -1.75
Trub1Q8C0D0 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Trub1Q8C0D0 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Trub1Q8C0D0 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Trub1Q8C0D0 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Trub1Q8C0D0 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
Trub1Q8C0D0 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.09□□□□□ -1.76
Trub1Q8C0D0 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
Trub1Q8C0D0 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.09□□□□□ -1.76
Trub1Q8C0D0 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trub1Q8C0D0 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trub1Q8C0D0 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trub1Q8C0D0 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.08□□□□□ -1.76
Trub1Q8C0D0 Gm15313-201ENSMUST00000119179 282 ntBASIC4.08□□□□□ -1.76
Trub1Q8C0D0 Gm11718-201ENSMUST00000119942 537 ntBASIC4.08□□□□□ -1.76
Trub1Q8C0D0 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4.08□□□□□ -1.76
Trub1Q8C0D0 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC4.08□□□□□ -1.76
Trub1Q8C0D0 Gm25456-201ENSMUST00000157952 109 ntBASIC4.08□□□□□ -1.76
Trub1Q8C0D0 Gm21960-201ENSMUST00000181924 452 ntBASIC4.08□□□□□ -1.76
Trub1Q8C0D0 Mir7031-201ENSMUST00000183860 65 ntBASIC4.08□□□□□ -1.76
Trub1Q8C0D0 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Trub1Q8C0D0 Gm28614-201ENSMUST00000186483 458 ntBASIC4.08□□□□□ -1.76
Trub1Q8C0D0 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trub1Q8C0D0 Gm38061-201ENSMUST00000192490 365 ntBASIC4.08□□□□□ -1.76
Trub1Q8C0D0 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC4.08□□□□□ -1.76
Trub1Q8C0D0 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC4.08□□□□□ -1.76
Trub1Q8C0D0 Gm45032-201ENSMUST00000205375 520 ntBASIC4.08□□□□□ -1.76
Trub1Q8C0D0 Gm18944-201ENSMUST00000207672 643 ntBASIC4.08□□□□□ -1.76
Trub1Q8C0D0 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trub1Q8C0D0 Gm5176-201ENSMUST00000218244 1227 ntBASIC4.08□□□□□ -1.76
Trub1Q8C0D0 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC4.08□□□□□ -1.76
Trub1Q8C0D0 AC154634.3-201ENSMUST00000224589 736 ntBASIC4.08□□□□□ -1.76
Trub1Q8C0D0 CT025536.1-201ENSMUST00000226744 844 ntBASIC4.08□□□□□ -1.76
Trub1Q8C0D0 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.08□□□□□ -1.76
Trub1Q8C0D0 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Trub1Q8C0D0 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trub1Q8C0D0 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
Trub1Q8C0D0 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trub1Q8C0D0 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Trub1Q8C0D0 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
Trub1Q8C0D0 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trub1Q8C0D0 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.07□□□□□ -1.76
Trub1Q8C0D0 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trub1Q8C0D0 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trub1Q8C0D0 Gm4736-201ENSMUST00000100870 380 ntBASIC4.07□□□□□ -1.76
Trub1Q8C0D0 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Trub1Q8C0D0 Gm14816-201ENSMUST00000117174 294 ntBASIC4.07□□□□□ -1.76
Trub1Q8C0D0 Gm11645-201ENSMUST00000121589 649 ntBASIC4.07□□□□□ -1.76
Trub1Q8C0D0 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Trub1Q8C0D0 Gm23905-201ENSMUST00000157568 109 ntBASIC4.07□□□□□ -1.76
Trub1Q8C0D0 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC4.07□□□□□ -1.76
Trub1Q8C0D0 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.07□□□□□ -1.76
Trub1Q8C0D0 Gm27828-201ENSMUST00000184108 119 ntBASIC4.07□□□□□ -1.76
Trub1Q8C0D0 Gm28615-201ENSMUST00000187527 482 ntBASIC4.07□□□□□ -1.76
Trub1Q8C0D0 Gm17916-202ENSMUST00000187634 1187 ntBASIC4.07□□□□□ -1.76
Trub1Q8C0D0 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Trub1Q8C0D0 Gm37710-201ENSMUST00000193501 1274 ntBASIC4.07□□□□□ -1.76
Trub1Q8C0D0 Gm43424-201ENSMUST00000200484 253 ntBASIC4.07□□□□□ -1.76
Trub1Q8C0D0 Gm7468-201ENSMUST00000203900 652 ntBASIC4.07□□□□□ -1.76
Trub1Q8C0D0 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trub1Q8C0D0 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Trub1Q8C0D0 Gm31931-201ENSMUST00000219666 222 ntBASIC4.07□□□□□ -1.76
Trub1Q8C0D0 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.07□□□□□ -1.76
Trub1Q8C0D0 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.07□□□□□ -1.76
Trub1Q8C0D0 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Trub1Q8C0D0 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Trub1Q8C0D0 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Trub1Q8C0D0 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Trub1Q8C0D0 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.07□□□□□ -1.76
Trub1Q8C0D0 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Trub1Q8C0D0 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Trub1Q8C0D0 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
Trub1Q8C0D0 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Trub1Q8C0D0 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Trub1Q8C0D0 BC055308-201ENSMUST00000193380 2538 ntBASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Trub1Q8C0D0 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Trub1Q8C0D0 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Gm23948-201ENSMUST00000104030 132 ntBASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Gm13677-201ENSMUST00000120739 595 ntBASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Gm14649-201ENSMUST00000121814 324 ntBASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Gm23753-201ENSMUST00000157575 149 ntBASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Gm7241-201ENSMUST00000159853 357 ntBASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Gm16285-201ENSMUST00000162999 347 ntBASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Gm4222-201ENSMUST00000165784 470 ntBASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Gm11394-201ENSMUST00000181421 517 ntBASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Mir6960-201ENSMUST00000183449 61 ntBASIC4.06□□□□□ -1.76
Trub1Q8C0D0 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Gm28967-201ENSMUST00000187351 281 ntBASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Gm29334-201ENSMUST00000190334 357 ntBASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Gm8820-201ENSMUST00000204077 571 ntBASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Gm44694-201ENSMUST00000205317 1298 ntBASIC4.06□□□□□ -1.76
Trub1Q8C0D0 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 129.8 ms