Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm37498-201ENSMUST00000193524 4002 ntBASIC5.54□□□□□ -1.52
Usp47Q8BY87 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Usp47Q8BY87 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Usp47Q8BY87 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Usp47Q8BY87 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Usp47Q8BY87 Gm15361-201ENSMUST00000119320 444 ntBASIC5.54□□□□□ -1.52
Usp47Q8BY87 Gm14775-201ENSMUST00000122089 310 ntBASIC5.54□□□□□ -1.52
Usp47Q8BY87 Gm25436-201ENSMUST00000158275 145 ntBASIC5.54□□□□□ -1.52
Usp47Q8BY87 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC5.54□□□□□ -1.52
Usp47Q8BY87 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.54□□□□□ -1.52
Usp47Q8BY87 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC5.54□□□□□ -1.52
Usp47Q8BY87 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Usp47Q8BY87 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Usp47Q8BY87 Gm23518-201ENSMUST00000082835 153 ntBASIC5.54□□□□□ -1.52
Usp47Q8BY87 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Usp47Q8BY87 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Usp47Q8BY87 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Usp47Q8BY87 Gm23322-201ENSMUST00000104464 167 ntBASIC5.53□□□□□ -1.52
Usp47Q8BY87 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Usp47Q8BY87 Gm11372-201ENSMUST00000117348 570 ntBASIC5.53□□□□□ -1.52
Usp47Q8BY87 Gm7219-201ENSMUST00000119619 297 ntBASIC5.53□□□□□ -1.52
Usp47Q8BY87 Gm13677-201ENSMUST00000120739 595 ntBASIC5.53□□□□□ -1.52
Usp47Q8BY87 Gm27189-201ENSMUST00000184119 190 ntBASIC5.53□□□□□ -1.52
Usp47Q8BY87 Gm37241-201ENSMUST00000191736 523 ntBASIC5.53□□□□□ -1.52
Usp47Q8BY87 Gm6057-201ENSMUST00000195927 314 ntBASIC5.53□□□□□ -1.52
Usp47Q8BY87 Gm8874-201ENSMUST00000196826 286 ntBASIC5.53□□□□□ -1.52
Usp47Q8BY87 Igkv8-31-201ENSMUST00000200040 372 ntBASIC5.53□□□□□ -1.52
Usp47Q8BY87 Gm18944-201ENSMUST00000207672 643 ntBASIC5.53□□□□□ -1.52
Usp47Q8BY87 AC153936.1-201ENSMUST00000219874 395 ntBASIC5.53□□□□□ -1.52
Usp47Q8BY87 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC5.53□□□□□ -1.52
Usp47Q8BY87 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Usp47Q8BY87 Gm24626-201ENSMUST00000082621 161 ntBASIC5.53□□□□□ -1.52
Usp47Q8BY87 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Usp47Q8BY87 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Usp47Q8BY87 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
Usp47Q8BY87 Gm9314-201ENSMUST00000199881 1528 ntBASIC5.52□□□□□ -1.53
Usp47Q8BY87 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Usp47Q8BY87 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Usp47Q8BY87 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Usp47Q8BY87 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Usp47Q8BY87 Gm25833-201ENSMUST00000104137 133 ntBASIC5.52□□□□□ -1.53
Usp47Q8BY87 Gm13664-201ENSMUST00000117304 345 ntBASIC5.52□□□□□ -1.53
Usp47Q8BY87 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC5.52□□□□□ -1.53
Usp47Q8BY87 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Usp47Q8BY87 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Usp47Q8BY87 Gm22059-201ENSMUST00000157544 104 ntBASIC5.52□□□□□ -1.53
Usp47Q8BY87 Gm24553-201ENSMUST00000158653 131 ntBASIC5.52□□□□□ -1.53
Usp47Q8BY87 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC5.52□□□□□ -1.53
Usp47Q8BY87 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC5.52□□□□□ -1.53
Usp47Q8BY87 Gm28924-201ENSMUST00000190012 241 ntBASIC5.52□□□□□ -1.53
Usp47Q8BY87 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Usp47Q8BY87 AC153969.1-201ENSMUST00000214047 2605 ntBASIC5.52□□□□□ -1.53
Usp47Q8BY87 AC127270.2-201ENSMUST00000221337 247 ntBASIC5.52□□□□□ -1.53
Usp47Q8BY87 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Usp47Q8BY87 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Usp47Q8BY87 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Usp47Q8BY87 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Usp47Q8BY87 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Usp47Q8BY87 Gm13831-201ENSMUST00000118764 302 ntBASIC5.51□□□□□ -1.53
Usp47Q8BY87 Gm12577-201ENSMUST00000119701 574 ntBASIC5.51□□□□□ -1.53
Usp47Q8BY87 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC5.51□□□□□ -1.53
Usp47Q8BY87 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC5.51□□□□□ -1.53
Usp47Q8BY87 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Usp47Q8BY87 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Usp47Q8BY87 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Usp47Q8BY87 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Usp47Q8BY87 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Usp47Q8BY87 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC5.51□□□□□ -1.53
Usp47Q8BY87 Gm42983-201ENSMUST00000199879 815 ntBASIC5.51□□□□□ -1.53
Usp47Q8BY87 Gm6240-201ENSMUST00000208014 473 ntBASIC5.51□□□□□ -1.53
Usp47Q8BY87 AC158523.1-201ENSMUST00000221398 328 ntBASIC5.51□□□□□ -1.53
Usp47Q8BY87 Gm22155-201ENSMUST00000083836 162 ntBASIC5.51□□□□□ -1.53
Usp47Q8BY87 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Usp47Q8BY87 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
Usp47Q8BY87 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
Usp47Q8BY87 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Usp47Q8BY87 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Usp47Q8BY87 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC5.51□□□□□ -1.53
Usp47Q8BY87 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Usp47Q8BY87 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Usp47Q8BY87 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Usp47Q8BY87 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC5.51□□□□□ -1.53
Usp47Q8BY87 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC5.51□□□□□ -1.53
Usp47Q8BY87 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Usp47Q8BY87 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Usp47Q8BY87 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Usp47Q8BY87 Gm38073-201ENSMUST00000195141 3665 ntBASIC5.5□□□□□ -1.53
Usp47Q8BY87 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Usp47Q8BY87 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Usp47Q8BY87 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Usp47Q8BY87 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Usp47Q8BY87 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Usp47Q8BY87 Gm12379-201ENSMUST00000119607 391 ntBASIC5.5□□□□□ -1.53
Usp47Q8BY87 Gm15014-201ENSMUST00000120742 258 ntBASIC5.5□□□□□ -1.53
Usp47Q8BY87 Gm24534-201ENSMUST00000157949 291 ntBASIC5.5□□□□□ -1.53
Usp47Q8BY87 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC5.5□□□□□ -1.53
Usp47Q8BY87 Gm28263-201ENSMUST00000185884 400 ntBASIC5.5□□□□□ -1.53
Usp47Q8BY87 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC5.5□□□□□ -1.53
Usp47Q8BY87 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC5.5□□□□□ -1.53
Usp47Q8BY87 Gm43717-201ENSMUST00000198684 310 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms