Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Gm43929-201ENSMUST00000203025 409 ntBASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Gm5001-201ENSMUST00000204361 331 ntBASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Gm44816-201ENSMUST00000206666 477 ntBASIC6.64□□□□□ -1.35
Usp40Q8BWR4 AC166902.1-201ENSMUST00000216653 517 ntBASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Gm9628-201ENSMUST00000222169 725 ntBASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Gm19154-201ENSMUST00000223330 940 ntBASIC6.64□□□□□ -1.35
Usp40Q8BWR4 AC116656.1-201ENSMUST00000227040 755 ntBASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Gm9762-201ENSMUST00000036976 444 ntBASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Gm10115-201ENSMUST00000076071 1228 ntBASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Usp40Q8BWR4 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Gm42614-201ENSMUST00000198724 1554 ntBASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Gm42701-201ENSMUST00000196117 1657 ntBASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Gm37764-201ENSMUST00000194664 2150 ntBASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Gm14352-201ENSMUST00000119250 449 ntBASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Gm13865-201ENSMUST00000120957 865 ntBASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Gm13220-201ENSMUST00000121535 508 ntBASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Gm12041-201ENSMUST00000121606 602 ntBASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Gm13024-201ENSMUST00000121756 718 ntBASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Gm23171-201ENSMUST00000157159 264 ntBASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Gm24944-201ENSMUST00000158330 128 ntBASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Gm25839-201ENSMUST00000158921 103 ntBASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Gm23505-201ENSMUST00000158989 130 ntBASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Gm23379-201ENSMUST00000180026 107 ntBASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Gm28779-201ENSMUST00000189678 323 ntBASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Gm37946-201ENSMUST00000192064 347 ntBASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Gm36983-201ENSMUST00000192280 1102 ntBASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Gm37167-201ENSMUST00000194946 396 ntBASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Gm43088-201ENSMUST00000197530 2347 ntBASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Gm32536-201ENSMUST00000205209 445 ntBASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Gm8125-201ENSMUST00000216602 738 ntBASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
Usp40Q8BWR4 AC153975.1-201ENSMUST00000220087 926 ntBASIC6.63□□□□□ -1.35
Usp40Q8BWR4 AC132121.1-201ENSMUST00000220774 332 ntBASIC6.63□□□□□ -1.35
Usp40Q8BWR4 AC187103.2-201ENSMUST00000223605 1617 ntBASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Usp40Q8BWR4 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Gm19514-201ENSMUST00000206856 4489 ntBASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Gm14981-201ENSMUST00000117325 943 ntBASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Snrpert-201ENSMUST00000121967 279 ntBASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Gm24385-201ENSMUST00000122694 350 ntBASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Gm3160-201ENSMUST00000128343 607 ntBASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Mup-ps4-201ENSMUST00000151005 539 ntBASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Gm24251-201ENSMUST00000157324 114 ntBASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Gm23906-201ENSMUST00000157573 128 ntBASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Gm8221-201ENSMUST00000178052 564 ntBASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Gm4842-201ENSMUST00000183237 835 ntBASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Gm27538-201ENSMUST00000185065 294 ntBASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Gm37878-201ENSMUST00000192108 387 ntBASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Gm8599-201ENSMUST00000193033 457 ntBASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Gm38279-201ENSMUST00000194067 1131 ntBASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Ighv1-41-201ENSMUST00000194414 329 ntBASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Gm29781-201ENSMUST00000203862 478 ntBASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Gm45651-201ENSMUST00000210857 335 ntBASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Gm7948-201ENSMUST00000212607 844 ntBASIC6.62□□□□□ -1.35
Usp40Q8BWR4 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC6.62□□□□□ -1.35
Usp40Q8BWR4 AC122301.1-201ENSMUST00000219625 507 ntBASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Gm18338-201ENSMUST00000222381 560 ntBASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Gm6988-201ENSMUST00000222676 375 ntBASIC6.62□□□□□ -1.35
Usp40Q8BWR4 AC154335.2-201ENSMUST00000225916 638 ntBASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Gm16415-201ENSMUST00000080097 489 ntBASIC6.62□□□□□ -1.35
Usp40Q8BWR4 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Gm24707-201ENSMUST00000082812 107 ntBASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Gm25140-201ENSMUST00000083254 140 ntBASIC6.62□□□□□ -1.35
Usp40Q8BWR4 Gm24765-201ENSMUST00000083691 103 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 117.3 ms