Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 AC131068.3-201ENSMUST00000228438 1456 ntBASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Gm24788-201ENSMUST00000104283 156 ntBASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Gm22968-201ENSMUST00000157955 118 ntBASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Gm16571-201ENSMUST00000159112 291 ntBASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Gm19427-201ENSMUST00000183619 208 ntBASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Gm27899-201ENSMUST00000184715 64 ntBASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Mir6943-201ENSMUST00000185186 66 ntBASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Gm28615-201ENSMUST00000187527 482 ntBASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Gm29668-201ENSMUST00000187802 315 ntBASIC4.39□□□□□ -1.71
Nup54Q8BTS4 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Gm17953-201ENSMUST00000192061 667 ntBASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Trbv28-201ENSMUST00000192804 264 ntBASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Gm43586-201ENSMUST00000195948 310 ntBASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Gm44765-201ENSMUST00000206927 601 ntBASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Gm18043-201ENSMUST00000216741 739 ntBASIC4.39□□□□□ -1.71
Nup54Q8BTS4 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.39□□□□□ -1.71
Nup54Q8BTS4 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC4.39□□□□□ -1.71
Nup54Q8BTS4 AC154241.1-201ENSMUST00000223952 356 ntBASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Gm26072-201ENSMUST00000083135 107 ntBASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.39□□□□□ -1.71
Nup54Q8BTS4 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.39□□□□□ -1.71
Nup54Q8BTS4 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Nup54Q8BTS4 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
Nup54Q8BTS4 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Svet1-201ENSMUST00000209370 3940 ntBASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Gm15076-201ENSMUST00000117076 474 ntBASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Gm14365-201ENSMUST00000117535 587 ntBASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Gm12994-201ENSMUST00000119601 447 ntBASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Gm11325-201ENSMUST00000119967 469 ntBASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Gm14776-201ENSMUST00000121029 887 ntBASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Gm25908-201ENSMUST00000157624 98 ntBASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Gm26000-201ENSMUST00000157991 107 ntBASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Gm24854-201ENSMUST00000158025 98 ntBASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Gm22211-201ENSMUST00000158097 156 ntBASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Gm4045-201ENSMUST00000204076 310 ntBASIC4.38□□□□□ -1.71
Nup54Q8BTS4 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC4.38□□□□□ -1.71
Nup54Q8BTS4 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC4.38□□□□□ -1.71
Nup54Q8BTS4 AC140368.1-202ENSMUST00000226131 658 ntBASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Nup54Q8BTS4 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC4.37□□□□□ -1.71
Nup54Q8BTS4 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Nup54Q8BTS4 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Nup54Q8BTS4 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Nup54Q8BTS4 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.37□□□□□ -1.71
Nup54Q8BTS4 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Nup54Q8BTS4 Gm42729-201ENSMUST00000201770 2930 ntBASIC4.37□□□□□ -1.71
Nup54Q8BTS4 AC124446.1-201ENSMUST00000221027 2644 ntBASIC4.37□□□□□ -1.71
Nup54Q8BTS4 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
Nup54Q8BTS4 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Nup54Q8BTS4 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Nup54Q8BTS4 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Nup54Q8BTS4 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.37□□□□□ -1.71
Nup54Q8BTS4 Gm14861-201ENSMUST00000119451 455 ntBASIC4.37□□□□□ -1.71
Nup54Q8BTS4 Gm15019-201ENSMUST00000120148 434 ntBASIC4.37□□□□□ -1.71
Nup54Q8BTS4 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Nup54Q8BTS4 Gm3160-201ENSMUST00000128343 607 ntBASIC4.37□□□□□ -1.71
Nup54Q8BTS4 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC4.37□□□□□ -1.71
Nup54Q8BTS4 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Nup54Q8BTS4 Gm22156-201ENSMUST00000158409 141 ntBASIC4.37□□□□□ -1.71
Nup54Q8BTS4 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC4.37□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms