Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
Ccdc40Q8BI79 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Ccdc40Q8BI79 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Ccdc40Q8BI79 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Ccdc40Q8BI79 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Ccdc40Q8BI79 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC4.62□□□□□ -1.67
Ccdc40Q8BI79 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Ccdc40Q8BI79 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Ccdc40Q8BI79 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.62□□□□□ -1.67
Ccdc40Q8BI79 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
Ccdc40Q8BI79 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Ccdc40Q8BI79 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Gm4596-201ENSMUST00000117197 442 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Gm16089-201ENSMUST00000117679 336 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Gm11404-201ENSMUST00000120872 494 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Gm14776-201ENSMUST00000121029 887 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Gm25525-201ENSMUST00000177701 107 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Gm26178-201ENSMUST00000177706 107 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Gm26465-201ENSMUST00000178517 107 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Gm24317-201ENSMUST00000178536 107 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Gm25021-201ENSMUST00000179184 107 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Gm22995-201ENSMUST00000179670 107 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Gm24424-201ENSMUST00000179714 107 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Gm24389-201ENSMUST00000179962 107 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Gm25672-201ENSMUST00000180111 107 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Gm28503-201ENSMUST00000185966 147 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Gm29163-201ENSMUST00000188029 107 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Gm6719-201ENSMUST00000202067 335 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Gm45392-201ENSMUST00000210441 214 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Gm17779-201ENSMUST00000213395 394 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 AC124549.1-201ENSMUST00000225912 333 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 AC139294.2-201ENSMUST00000227159 285 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Gm25739-201ENSMUST00000082886 107 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Gm23815-201ENSMUST00000083231 107 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Mir28a-201ENSMUST00000083560 86 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Gm23520-201ENSMUST00000093736 107 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Gm21033-201ENSMUST00000208590 2608 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Gm26996-201ENSMUST00000204418 1359 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Slfn8-202ENSMUST00000092838 3529 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Gm5155-201ENSMUST00000072381 2841 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Ccdc40Q8BI79 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Gm12571-201ENSMUST00000118132 243 ntBASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Gm14067-201ENSMUST00000119340 314 ntBASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Gm13487-201ENSMUST00000122240 864 ntBASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Gm23585-201ENSMUST00000157656 102 ntBASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Gm16114-201ENSMUST00000161930 300 ntBASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Gm22243-201ENSMUST00000178754 120 ntBASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Gm26950-201ENSMUST00000182734 498 ntBASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Gm4842-201ENSMUST00000183237 835 ntBASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Gm43494-201ENSMUST00000197672 388 ntBASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Gm17956-201ENSMUST00000199931 838 ntBASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Gm44865-201ENSMUST00000207240 531 ntBASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 AC121986.1-201ENSMUST00000218588 781 ntBASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Gm3338-201ENSMUST00000220982 269 ntBASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 AC164437.2-201ENSMUST00000228915 797 ntBASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Snord21-201ENSMUST00000082519 94 ntBASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Gm24144-201ENSMUST00000082632 111 ntBASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Gm42728-201ENSMUST00000202644 1552 ntBASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.6□□□□□ -1.67
Ccdc40Q8BI79 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 110 ms