Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm44135-201ENSMUST00000205221 368 ntBASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Gm17838-201ENSMUST00000205872 876 ntBASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Gm8189-203ENSMUST00000211159 1225 ntBASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 AC125399.1-201ENSMUST00000224236 595 ntBASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 AC133910.1-201ENSMUST00000228128 624 ntBASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Gm45644-201ENSMUST00000210255 2740 ntBASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 AC102847.2-201ENSMUST00000227799 2906 ntBASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Ubfd1Q78JW9 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Gm19136-201ENSMUST00000190706 2067 ntBASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 AC139218.1-201ENSMUST00000228215 4287 ntBASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 AC190403.1-201ENSMUST00000224515 1325 ntBASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Gm43130-201ENSMUST00000197721 3907 ntBASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Gm15659-201ENSMUST00000118881 341 ntBASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Gm15493-201ENSMUST00000119461 528 ntBASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Rab9b-ps1-201ENSMUST00000119785 606 ntBASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Gm14977-201ENSMUST00000121626 812 ntBASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Gm25103-201ENSMUST00000122671 318 ntBASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Gm3362-201ENSMUST00000148102 466 ntBASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Gm3053-201ENSMUST00000161709 616 ntBASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Gm18417-201ENSMUST00000176564 648 ntBASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Gm25019-201ENSMUST00000179732 110 ntBASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Gm18727-201ENSMUST00000185981 553 ntBASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Gm28872-201ENSMUST00000191518 158 ntBASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Gm8823-201ENSMUST00000193158 433 ntBASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Gm30043-201ENSMUST00000196689 733 ntTSL 2 BASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Ighv1-79-201ENSMUST00000200152 350 ntBASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Gm9375-201ENSMUST00000208899 903 ntBASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Gm17766-201ENSMUST00000209223 442 ntBASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Gm17850-201ENSMUST00000210023 1154 ntBASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Gm29817-201ENSMUST00000210098 172 ntBASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Gm45912-201ENSMUST00000210646 543 ntBASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 AC069561.3-201ENSMUST00000217321 114 ntBASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Gm8158-201ENSMUST00000219220 465 ntBASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Gm8112-201ENSMUST00000219637 465 ntBASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 AC153794.2-201ENSMUST00000222650 550 ntBASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 AC168062.2-201ENSMUST00000228907 422 ntBASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
Ubfd1Q78JW9 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Ubfd1Q78JW9 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.64
Ubfd1Q78JW9 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC4.84□□□□□ -1.64
Ubfd1Q78JW9 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Ubfd1Q78JW9 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
Ubfd1Q78JW9 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 AC129085.3-201ENSMUST00000225686 1705 ntBASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms