Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Gm11878-201ENSMUST00000117908 400 ntBASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Gm14897-201ENSMUST00000118213 207 ntBASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Gm14876-201ENSMUST00000120795 327 ntBASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Gm6175-201ENSMUST00000121351 400 ntBASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Gm15335-201ENSMUST00000122442 411 ntBASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Gm6058-201ENSMUST00000154261 399 ntBASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Gm25439-201ENSMUST00000158280 131 ntBASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Gm28615-201ENSMUST00000187527 482 ntBASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Gm28151-201ENSMUST00000189404 951 ntBASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Gm38050-201ENSMUST00000191904 238 ntBASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Ighv1-83-201ENSMUST00000199643 351 ntBASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Gm8719-201ENSMUST00000203602 534 ntBASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Gm44055-201ENSMUST00000204376 247 ntBASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Gm2628-201ENSMUST00000218019 426 ntBASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 AC154552.4-201ENSMUST00000222171 151 ntBASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 AC125539.2-201ENSMUST00000228339 753 ntBASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Gm44801-201ENSMUST00000207644 2060 ntBASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Gm2223-201ENSMUST00000112099 1350 ntBASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Gm8822-201ENSMUST00000118948 2347 ntBASIC5.39□□□□□ -1.55
Scaf4Q6PFF0 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Gm14001-201ENSMUST00000118847 247 ntBASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Gm13503-201ENSMUST00000119017 446 ntBASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Defa-ps12-201ENSMUST00000122353 193 ntBASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Gm25781-201ENSMUST00000122527 84 ntBASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 n-R5s19-201ENSMUST00000122793 120 ntBASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Mup-ps2-201ENSMUST00000142602 533 ntBASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Gm22223-201ENSMUST00000157360 125 ntBASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Gm23501-201ENSMUST00000157744 256 ntBASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Gm29148-201ENSMUST00000188140 336 ntBASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Gm37191-201ENSMUST00000193346 388 ntBASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Ighv1-14-201ENSMUST00000194015 402 ntBASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Igkv4-73-201ENSMUST00000199760 358 ntBASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Gm19140-201ENSMUST00000209790 421 ntBASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Gm29818-201ENSMUST00000218070 165 ntBASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 AC105407.3-201ENSMUST00000224161 648 ntBASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Scaf4Q6PFF0 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms