Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC4.24□□□□□ -1.73
Six1Q62231 Neat1-201ENSMUST00000173672 20771 ntBASIC4.24□□□□□ -1.73
Six1Q62231 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Six1Q62231 AC131068.3-201ENSMUST00000228438 1456 ntBASIC4.24□□□□□ -1.73
Six1Q62231 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Six1Q62231 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
Six1Q62231 Gm13230-201ENSMUST00000120870 1575 ntBASIC4.23□□□□□ -1.73
Six1Q62231 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Six1Q62231 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Six1Q62231 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Six1Q62231 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Six1Q62231 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Six1Q62231 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Six1Q62231 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Six1Q62231 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Six1Q62231 Gm12638-201ENSMUST00000119531 298 ntBASIC4.23□□□□□ -1.73
Six1Q62231 Gm12103-201ENSMUST00000121892 362 ntBASIC4.23□□□□□ -1.73
Six1Q62231 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Six1Q62231 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC4.23□□□□□ -1.73
Six1Q62231 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC4.23□□□□□ -1.73
Six1Q62231 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC4.23□□□□□ -1.73
Six1Q62231 Gm16303-201ENSMUST00000161498 390 ntBASIC4.23□□□□□ -1.73
Six1Q62231 Gm27875-201ENSMUST00000184425 123 ntBASIC4.23□□□□□ -1.73
Six1Q62231 Mir6398-201ENSMUST00000184541 102 ntBASIC4.23□□□□□ -1.73
Six1Q62231 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Six1Q62231 Gm18181-201ENSMUST00000190670 736 ntBASIC4.23□□□□□ -1.73
Six1Q62231 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
Six1Q62231 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC4.23□□□□□ -1.73
Six1Q62231 Gm44277-201ENSMUST00000205128 649 ntBASIC4.23□□□□□ -1.73
Six1Q62231 Gm45228-201ENSMUST00000206585 352 ntBASIC4.23□□□□□ -1.73
Six1Q62231 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC4.23□□□□□ -1.73
Six1Q62231 Gm45157-201ENSMUST00000208729 401 ntBASIC4.23□□□□□ -1.73
Six1Q62231 Gm44554-201ENSMUST00000208738 147 ntBASIC4.23□□□□□ -1.73
Six1Q62231 Gm18242-201ENSMUST00000218455 542 ntBASIC4.23□□□□□ -1.73
Six1Q62231 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4.23□□□□□ -1.73
Six1Q62231 AC132384.13-201ENSMUST00000219556 1159 ntBASIC4.23□□□□□ -1.73
Six1Q62231 Gm46369-201ENSMUST00000221577 401 ntBASIC4.23□□□□□ -1.73
Six1Q62231 AC139758.1-201ENSMUST00000226573 930 ntBASIC4.23□□□□□ -1.73
Six1Q62231 AC192088.2-201ENSMUST00000227590 411 ntBASIC4.23□□□□□ -1.73
Six1Q62231 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Six1Q62231 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Six1Q62231 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Six1Q62231 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Six1Q62231 Ube2nl-201ENSMUST00000085228 456 ntBASIC4.23□□□□□ -1.73
Six1Q62231 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Six1Q62231 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC4.23□□□□□ -1.73
Six1Q62231 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Six1Q62231 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Six1Q62231 Gm37303-201ENSMUST00000194202 1559 ntBASIC4.23□□□□□ -1.73
Six1Q62231 Gm42658-201ENSMUST00000197199 1575 ntBASIC4.23□□□□□ -1.73
Six1Q62231 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Six1Q62231 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Six1Q62231 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.22□□□□□ -1.73
Six1Q62231 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Six1Q62231 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.22□□□□□ -1.73
Six1Q62231 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Six1Q62231 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Six1Q62231 Igkv1-132-201ENSMUST00000103305 362 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Six1Q62231 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Six1Q62231 Gm13607-201ENSMUST00000117875 539 ntBASIC4.22□□□□□ -1.73
Six1Q62231 Gm13865-201ENSMUST00000120957 865 ntBASIC4.22□□□□□ -1.73
Six1Q62231 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Six1Q62231 Gm23171-201ENSMUST00000157159 264 ntBASIC4.22□□□□□ -1.73
Six1Q62231 Gm23906-201ENSMUST00000157573 128 ntBASIC4.22□□□□□ -1.73
Six1Q62231 Gm22726-201ENSMUST00000158089 179 ntBASIC4.22□□□□□ -1.73
Six1Q62231 Gm25839-201ENSMUST00000158921 103 ntBASIC4.22□□□□□ -1.73
Six1Q62231 Gm15508-201ENSMUST00000160330 325 ntBASIC4.22□□□□□ -1.73
Six1Q62231 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Six1Q62231 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Six1Q62231 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Six1Q62231 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.22□□□□□ -1.73
Six1Q62231 Gm29428-201ENSMUST00000190086 409 ntBASIC4.22□□□□□ -1.73
Six1Q62231 Gm43855-201ENSMUST00000197462 507 ntBASIC4.22□□□□□ -1.73
Six1Q62231 n-TSaga9-201ENSMUST00000197675 107 ntBASIC4.22□□□□□ -1.73
Six1Q62231 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC4.22□□□□□ -1.73
Six1Q62231 Gm42625-201ENSMUST00000198611 922 ntBASIC4.22□□□□□ -1.73
Six1Q62231 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.22□□□□□ -1.73
Six1Q62231 Gm45081-201ENSMUST00000206281 572 ntBASIC4.22□□□□□ -1.73
Six1Q62231 Gm45031-201ENSMUST00000206800 288 ntBASIC4.22□□□□□ -1.73
Six1Q62231 Gm44559-201ENSMUST00000207177 1012 ntBASIC4.22□□□□□ -1.73
Six1Q62231 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Six1Q62231 Gm45608-201ENSMUST00000210948 389 ntBASIC4.22□□□□□ -1.73
Six1Q62231 Gm45593-201ENSMUST00000211415 752 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Six1Q62231 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC4.22□□□□□ -1.73
Six1Q62231 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC4.22□□□□□ -1.73
Six1Q62231 Gm21089-201ENSMUST00000215843 325 ntBASIC4.22□□□□□ -1.73
Six1Q62231 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC4.22□□□□□ -1.73
Six1Q62231 CR974592.1-201ENSMUST00000220422 574 ntBASIC4.22□□□□□ -1.73
Six1Q62231 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC4.22□□□□□ -1.73
Six1Q62231 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Six1Q62231 Gm23099-201ENSMUST00000083454 139 ntBASIC4.22□□□□□ -1.73
Six1Q62231 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Six1Q62231 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Six1Q62231 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Six1Q62231 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Six1Q62231 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.22□□□□□ -1.73
Six1Q62231 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Six1Q62231 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Six1Q62231 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Six1Q62231 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms