Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm23385-201ENSMUST00000158592 295 ntBASIC3.48□□□□□ -1.85
Trav5d-4Q5R1F6 Gm2389-201ENSMUST00000160487 189 ntBASIC3.48□□□□□ -1.85
Trav5d-4Q5R1F6 Gm5974-201ENSMUST00000181607 986 ntBASIC3.48□□□□□ -1.85
Trav5d-4Q5R1F6 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC3.48□□□□□ -1.85
Trav5d-4Q5R1F6 Gm5252-201ENSMUST00000189030 909 ntBASIC3.48□□□□□ -1.85
Trav5d-4Q5R1F6 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC3.48□□□□□ -1.85
Trav5d-4Q5R1F6 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC3.48□□□□□ -1.85
Trav5d-4Q5R1F6 Gm18462-201ENSMUST00000208112 417 ntBASIC3.48□□□□□ -1.85
Trav5d-4Q5R1F6 Gm46998-201ENSMUST00000221444 330 ntBASIC3.48□□□□□ -1.85
Trav5d-4Q5R1F6 Mir365-2-201ENSMUST00000083555 112 ntBASIC3.48□□□□□ -1.85
Trav5d-4Q5R1F6 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC3.48□□□□□ -1.85
Trav5d-4Q5R1F6 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Trav5d-4Q5R1F6 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Trav5d-4Q5R1F6 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Trav5d-4Q5R1F6 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Trav5d-4Q5R1F6 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
Trav5d-4Q5R1F6 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Trav5d-4Q5R1F6 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Trav5d-4Q5R1F6 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Trav5d-4Q5R1F6 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.48□□□□□ -1.85
Trav5d-4Q5R1F6 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Gm36927-201ENSMUST00000192504 1841 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 AC152981.1-201ENSMUST00000218320 2480 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Snora64-201ENSMUST00000104521 134 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Gm12465-201ENSMUST00000118591 300 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Gm12190-201ENSMUST00000120001 187 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Gm15480-201ENSMUST00000120442 519 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Gm6969-201ENSMUST00000140065 342 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Gm22158-201ENSMUST00000158411 126 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Gm17159-201ENSMUST00000169043 482 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Gm27468-201ENSMUST00000183577 106 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Gm29563-201ENSMUST00000187249 496 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Gm28997-201ENSMUST00000188759 429 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Gm28396-201ENSMUST00000190309 379 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Gm37241-201ENSMUST00000191736 523 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Gm17887-201ENSMUST00000200194 547 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Gm18100-201ENSMUST00000200897 452 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Gm6303-201ENSMUST00000210123 471 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 AC140930.4-201ENSMUST00000220750 150 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 AC159244.1-201ENSMUST00000220964 594 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 AC158523.1-201ENSMUST00000221398 328 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 AC168881.1-201ENSMUST00000226018 430 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 AC141884.1-201ENSMUST00000226327 636 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 AC119573.1-201ENSMUST00000227960 757 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 CT573086.3-201ENSMUST00000228762 594 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Gm23677-201ENSMUST00000083156 104 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Gm18422-202ENSMUST00000203798 2214 ntBASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Trav5d-4Q5R1F6 Gm43705-201ENSMUST00000195958 3717 ntBASIC3.46□□□□□ -1.85
Trav5d-4Q5R1F6 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Trav5d-4Q5R1F6 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Trav5d-4Q5R1F6 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Trav5d-4Q5R1F6 Gm23424-201ENSMUST00000103889 110 ntBASIC3.46□□□□□ -1.86
Trav5d-4Q5R1F6 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.46□□□□□ -1.86
Trav5d-4Q5R1F6 Gm14539-201ENSMUST00000117527 174 ntBASIC3.46□□□□□ -1.86
Trav5d-4Q5R1F6 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC3.46□□□□□ -1.86
Trav5d-4Q5R1F6 Gm15225-201ENSMUST00000120449 1017 ntBASIC3.46□□□□□ -1.86
Trav5d-4Q5R1F6 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC3.46□□□□□ -1.86
Trav5d-4Q5R1F6 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC3.46□□□□□ -1.86
Trav5d-4Q5R1F6 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC3.46□□□□□ -1.86
Trav5d-4Q5R1F6 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC3.46□□□□□ -1.86
Trav5d-4Q5R1F6 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC3.46□□□□□ -1.86
Trav5d-4Q5R1F6 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC3.46□□□□□ -1.86
Trav5d-4Q5R1F6 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC3.46□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms