Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Gm42961-201ENSMUST00000202023 181 ntBASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Gm44475-201ENSMUST00000204041 424 ntBASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Gm44634-201ENSMUST00000206119 152 ntBASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Gm23506-201ENSMUST00000083077 107 ntBASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Gm45470-201ENSMUST00000209685 7044 ntTSL 5 BASIC10.37□□□□□ -0.75
Trim41Q5NCC3 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim41Q5NCC3 AC164567.3-201ENSMUST00000217743 2869 ntBASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Gm43503-201ENSMUST00000200033 3408 ntBASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Gm8217-201ENSMUST00000119136 465 ntBASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Gm15335-201ENSMUST00000122442 411 ntBASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Gm24499-201ENSMUST00000158446 104 ntBASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Gm24561-201ENSMUST00000175182 95 ntBASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Gm28974-201ENSMUST00000187893 231 ntBASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Gm44322-201ENSMUST00000196830 115 ntBASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Gm17775-201ENSMUST00000198542 258 ntBASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Gm44219-201ENSMUST00000203005 273 ntBASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Gm45590-201ENSMUST00000209715 262 ntBASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC10.36□□□□□ -0.75
Trim41Q5NCC3 AC173482.4-201ENSMUST00000225096 348 ntBASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Gm37686-201ENSMUST00000194099 2309 ntBASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC10.36□□□□□ -0.75
Trim41Q5NCC3 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Gm43502-201ENSMUST00000200263 2596 ntBASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Gm7108-201ENSMUST00000118038 3407 ntBASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Gm12765-201ENSMUST00000117273 615 ntBASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Gm12110-201ENSMUST00000121601 579 ntBASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Gm12815-201ENSMUST00000121737 135 ntBASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Mir1903-201ENSMUST00000122574 80 ntBASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Gm22492-201ENSMUST00000157192 297 ntBASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Gm15970-201ENSMUST00000160623 834 ntBASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Gm18551-201ENSMUST00000195594 642 ntBASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Gm42672-201ENSMUST00000197821 352 ntBASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Gm44611-201ENSMUST00000207507 355 ntBASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC10.35□□□□□ -0.75
Trim41Q5NCC3 AC164567.2-201ENSMUST00000219363 445 ntBASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC10.35□□□□□ -0.75
Trim41Q5NCC3 CT010454.1-201ENSMUST00000225975 265 ntBASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Gm45406-201ENSMUST00000210161 1637 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Gm6818-201ENSMUST00000190556 2558 ntBASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trim41Q5NCC3 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim41Q5NCC3 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim41Q5NCC3 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trim41Q5NCC3 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trim41Q5NCC3 Gm43718-201ENSMUST00000197524 1857 ntBASIC10.34□□□□□ -0.75
Trim41Q5NCC3 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trim41Q5NCC3 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trim41Q5NCC3 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim41Q5NCC3 Mir466h-201ENSMUST00000104748 81 ntBASIC10.34□□□□□ -0.75
Trim41Q5NCC3 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trim41Q5NCC3 Gm9429-201ENSMUST00000117804 868 ntBASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms