Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC6.53□□□□□ -1.36
Ccdc88bQ4QRL3 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc88bQ4QRL3 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc88bQ4QRL3 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC6.53□□□□□ -1.36
Ccdc88bQ4QRL3 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC6.53□□□□□ -1.36
Ccdc88bQ4QRL3 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc88bQ4QRL3 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc88bQ4QRL3 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc88bQ4QRL3 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc88bQ4QRL3 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC6.53□□□□□ -1.36
Ccdc88bQ4QRL3 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC6.53□□□□□ -1.36
Ccdc88bQ4QRL3 AC127270.2-201ENSMUST00000221337 247 ntBASIC6.53□□□□□ -1.36
Ccdc88bQ4QRL3 AL645546.1-201ENSMUST00000225001 189 ntBASIC6.53□□□□□ -1.36
Ccdc88bQ4QRL3 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Ccdc88bQ4QRL3 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Ccdc88bQ4QRL3 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.36
Ccdc88bQ4QRL3 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.52□□□□□ -1.36
Ccdc88bQ4QRL3 Gm37412-201ENSMUST00000194866 4321 ntBASIC6.52□□□□□ -1.37
Ccdc88bQ4QRL3 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Ccdc88bQ4QRL3 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC6.52□□□□□ -1.37
Ccdc88bQ4QRL3 Gm7281-201ENSMUST00000160010 543 ntBASIC6.52□□□□□ -1.37
Ccdc88bQ4QRL3 Gm27158-201ENSMUST00000183813 238 ntBASIC6.52□□□□□ -1.37
Ccdc88bQ4QRL3 Gm7587-201ENSMUST00000207618 1021 ntBASIC6.52□□□□□ -1.37
Ccdc88bQ4QRL3 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC6.52□□□□□ -1.37
Ccdc88bQ4QRL3 AC139638.1-201ENSMUST00000218027 364 ntBASIC6.52□□□□□ -1.37
Ccdc88bQ4QRL3 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Ccdc88bQ4QRL3 Mir34b-201ENSMUST00000083558 84 ntBASIC6.52□□□□□ -1.37
Ccdc88bQ4QRL3 AC173482.1-201ENSMUST00000224494 3815 ntBASIC6.51□□□□□ -1.37
Ccdc88bQ4QRL3 Gm37195-201ENSMUST00000192006 3018 ntBASIC6.51□□□□□ -1.37
Ccdc88bQ4QRL3 AC167420.1-201ENSMUST00000222999 2121 ntBASIC6.51□□□□□ -1.37
Ccdc88bQ4QRL3 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc88bQ4QRL3 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC6.51□□□□□ -1.37
Ccdc88bQ4QRL3 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc88bQ4QRL3 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc88bQ4QRL3 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Ccdc88bQ4QRL3 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc88bQ4QRL3 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc88bQ4QRL3 Gm25407-201ENSMUST00000104102 134 ntBASIC6.51□□□□□ -1.37
Ccdc88bQ4QRL3 Gm25272-201ENSMUST00000104293 128 ntBASIC6.51□□□□□ -1.37
Ccdc88bQ4QRL3 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc88bQ4QRL3 Gm6265-201ENSMUST00000149263 231 ntBASIC6.51□□□□□ -1.37
Ccdc88bQ4QRL3 Mir6905-201ENSMUST00000184228 70 ntBASIC6.51□□□□□ -1.37
Ccdc88bQ4QRL3 Gm37300-201ENSMUST00000193327 280 ntBASIC6.51□□□□□ -1.37
Ccdc88bQ4QRL3 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC6.51□□□□□ -1.37
Ccdc88bQ4QRL3 AC154634.3-201ENSMUST00000224589 736 ntBASIC6.51□□□□□ -1.37
Ccdc88bQ4QRL3 AC144798.1-201ENSMUST00000228120 391 ntBASIC6.51□□□□□ -1.37
Ccdc88bQ4QRL3 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc88bQ4QRL3 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Ccdc88bQ4QRL3 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ccdc88bQ4QRL3 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Ccdc88bQ4QRL3 Gm43443-201ENSMUST00000202337 2393 ntBASIC6.5□□□□□ -1.37
Ccdc88bQ4QRL3 Gm4991-201ENSMUST00000118899 1552 ntBASIC6.5□□□□□ -1.37
Ccdc88bQ4QRL3 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC6.5□□□□□ -1.37
Ccdc88bQ4QRL3 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ccdc88bQ4QRL3 Gm22380-201ENSMUST00000157479 95 ntBASIC6.5□□□□□ -1.37
Ccdc88bQ4QRL3 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC6.5□□□□□ -1.37
Ccdc88bQ4QRL3 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC6.5□□□□□ -1.37
Ccdc88bQ4QRL3 Gm28997-201ENSMUST00000188759 429 ntBASIC6.5□□□□□ -1.37
Ccdc88bQ4QRL3 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC6.5□□□□□ -1.37
Ccdc88bQ4QRL3 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC6.5□□□□□ -1.37
Ccdc88bQ4QRL3 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Ccdc88bQ4QRL3 Gm23927-201ENSMUST00000082466 215 ntBASIC6.5□□□□□ -1.37
Ccdc88bQ4QRL3 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Ccdc88bQ4QRL3 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ccdc88bQ4QRL3 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Ccdc88bQ4QRL3 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Ccdc88bQ4QRL3 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Ccdc88bQ4QRL3 n-R5s219-201ENSMUST00000104328 132 ntBASIC6.49□□□□□ -1.37
Ccdc88bQ4QRL3 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Ccdc88bQ4QRL3 Gm24441-201ENSMUST00000157235 281 ntBASIC6.49□□□□□ -1.37
Ccdc88bQ4QRL3 Gm17060-201ENSMUST00000172394 824 ntBASIC6.49□□□□□ -1.37
Ccdc88bQ4QRL3 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC6.49□□□□□ -1.37
Ccdc88bQ4QRL3 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC6.49□□□□□ -1.37
Ccdc88bQ4QRL3 Mir7118-201ENSMUST00000197760 61 ntBASIC6.49□□□□□ -1.37
Ccdc88bQ4QRL3 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Ccdc88bQ4QRL3 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
Ccdc88bQ4QRL3 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Ccdc88bQ4QRL3 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Ccdc88bQ4QRL3 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc88bQ4QRL3 Gm14776-201ENSMUST00000121029 887 ntBASIC6.48□□□□□ -1.37
Ccdc88bQ4QRL3 Gm16300-201ENSMUST00000160031 1279 ntBASIC6.48□□□□□ -1.37
Ccdc88bQ4QRL3 Mir3058-201ENSMUST00000175126 91 ntBASIC6.48□□□□□ -1.37
Ccdc88bQ4QRL3 Gm6057-201ENSMUST00000195927 314 ntBASIC6.48□□□□□ -1.37
Ccdc88bQ4QRL3 Gm29704-201ENSMUST00000196011 253 ntBASIC6.48□□□□□ -1.37
Ccdc88bQ4QRL3 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Ccdc88bQ4QRL3 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Ccdc88bQ4QRL3 Mir215-201ENSMUST00000083628 112 ntBASIC6.48□□□□□ -1.37
Ccdc88bQ4QRL3 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc88bQ4QRL3 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc88bQ4QRL3 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc88bQ4QRL3 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC6.48□□□□□ -1.37
Ccdc88bQ4QRL3 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Ccdc88bQ4QRL3 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Ccdc88bQ4QRL3 Gm15018-201ENSMUST00000117090 633 ntBASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 Gm14875-201ENSMUST00000120881 319 ntBASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 Gm26320-201ENSMUST00000157742 306 ntBASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 Gm22968-201ENSMUST00000157955 118 ntBASIC6.47□□□□□ -1.37
Ccdc88bQ4QRL3 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 120.7 ms