Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.1□□□□□ -1.75
Trim40Q3UWA4 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.1□□□□□ -1.75
Trim40Q3UWA4 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Trim40Q3UWA4 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Gm12880-201ENSMUST00000120652 494 ntBASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Gm14649-201ENSMUST00000121814 324 ntBASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Gm25179-201ENSMUST00000122632 128 ntBASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Gm25342-201ENSMUST00000157459 122 ntBASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Gm4617-201ENSMUST00000178993 331 ntBASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Gm27715-201ENSMUST00000184714 260 ntBASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Gm28596-201ENSMUST00000185870 696 ntBASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Gm32295-201ENSMUST00000192558 696 ntBASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Gm38283-201ENSMUST00000193041 695 ntBASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Gm31260-201ENSMUST00000193478 696 ntBASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Gm42976-201ENSMUST00000200313 222 ntBASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Gm18007-201ENSMUST00000205019 844 ntBASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Gm18258-201ENSMUST00000210413 542 ntBASIC4.1□□□□□ -1.75
Trim40Q3UWA4 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Gm18487-201ENSMUST00000215826 878 ntBASIC4.1□□□□□ -1.75
Trim40Q3UWA4 AC164629.1-201ENSMUST00000220250 1113 ntBASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC4.1□□□□□ -1.75
Trim40Q3UWA4 AC154724.1-201ENSMUST00000225782 821 ntBASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Gm6462-201ENSMUST00000081488 304 ntBASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Mir188-201ENSMUST00000083464 68 ntBASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.1□□□□□ -1.75
Trim40Q3UWA4 AC147615.2-201ENSMUST00000219876 2154 ntBASIC4.1□□□□□ -1.75
Trim40Q3UWA4 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
Trim40Q3UWA4 AC129085.3-201ENSMUST00000225686 1705 ntBASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Gm24124-201ENSMUST00000104103 132 ntBASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Gm22472-201ENSMUST00000104115 134 ntBASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Gm25317-201ENSMUST00000116824 129 ntBASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Gm15021-201ENSMUST00000117832 742 ntBASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Gm11408-201ENSMUST00000117889 519 ntBASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Gm16383-201ENSMUST00000118122 232 ntBASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Gm15103-201ENSMUST00000119893 871 ntBASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Llph-ps2-201ENSMUST00000122000 393 ntBASIC4.09□□□□□ -1.75
Trim40Q3UWA4 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Gm17164-201ENSMUST00000169013 506 ntBASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Gm22646-201ENSMUST00000175130 115 ntBASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Gm29013-201ENSMUST00000187431 237 ntBASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Gm28191-201ENSMUST00000189112 211 ntBASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Vmn1r82-202ENSMUST00000191002 918 ntBASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Gm43712-201ENSMUST00000198020 291 ntBASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC4.09□□□□□ -1.75
Trim40Q3UWA4 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Trim40Q3UWA4 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Trim40Q3UWA4 AC117656.3-205ENSMUST00000224606 1205 ntBASIC4.09□□□□□ -1.75
Trim40Q3UWA4 AC102542.1-201ENSMUST00000225204 1138 ntBASIC4.09□□□□□ -1.75
Trim40Q3UWA4 AC132833.3-201ENSMUST00000227472 866 ntBASIC4.09□□□□□ -1.75
Trim40Q3UWA4 AC115357.1-201ENSMUST00000227575 466 ntBASIC4.09□□□□□ -1.75
Trim40Q3UWA4 AC154838.1-201ENSMUST00000228944 911 ntBASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Snord21-201ENSMUST00000082519 94 ntBASIC4.09□□□□□ -1.75
Trim40Q3UWA4 n-R5s13-201ENSMUST00000093707 119 ntBASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Gm7646-201ENSMUST00000198590 1346 ntBASIC4.09□□□□□ -1.75
Trim40Q3UWA4 AC190403.1-201ENSMUST00000224515 1325 ntBASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
Trim40Q3UWA4 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.09□□□□□ -1.75
Trim40Q3UWA4 Gm6545-201ENSMUST00000217186 1786 ntBASIC4.09□□□□□ -1.76
Trim40Q3UWA4 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.09□□□□□ -1.76
Trim40Q3UWA4 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
Trim40Q3UWA4 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
Trim40Q3UWA4 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.08□□□□□ -1.76
Trim40Q3UWA4 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms