Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col9a1Q05722 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Col9a1Q05722 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC6.56□□□□□ -1.36
Col9a1Q05722 AC133079.1-201ENSMUST00000220943 1881 ntBASIC6.56□□□□□ -1.36
Col9a1Q05722 Gm26018-201ENSMUST00000104406 128 ntBASIC6.56□□□□□ -1.36
Col9a1Q05722 Gm11935-201ENSMUST00000118608 399 ntBASIC6.56□□□□□ -1.36
Col9a1Q05722 Gm11366-201ENSMUST00000119279 429 ntBASIC6.56□□□□□ -1.36
Col9a1Q05722 Gm11693-201ENSMUST00000119625 565 ntBASIC6.56□□□□□ -1.36
Col9a1Q05722 Gm7931-201ENSMUST00000121537 271 ntBASIC6.56□□□□□ -1.36
Col9a1Q05722 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col9a1Q05722 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC6.56□□□□□ -1.36
Col9a1Q05722 Gm27723-201ENSMUST00000157398 63 ntBASIC6.56□□□□□ -1.36
Col9a1Q05722 Gm25666-201ENSMUST00000157702 107 ntBASIC6.56□□□□□ -1.36
Col9a1Q05722 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col9a1Q05722 Gm22367-201ENSMUST00000178930 132 ntBASIC6.56□□□□□ -1.36
Col9a1Q05722 Gm8807-201ENSMUST00000179328 492 ntBASIC6.56□□□□□ -1.36
Col9a1Q05722 Mir6907-201ENSMUST00000183764 71 ntBASIC6.56□□□□□ -1.36
Col9a1Q05722 Gm7837-201ENSMUST00000190873 412 ntBASIC6.56□□□□□ -1.36
Col9a1Q05722 Gm44456-201ENSMUST00000196554 89 ntBASIC6.56□□□□□ -1.36
Col9a1Q05722 Gm44348-201ENSMUST00000200165 122 ntBASIC6.56□□□□□ -1.36
Col9a1Q05722 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC6.56□□□□□ -1.36
Col9a1Q05722 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC6.56□□□□□ -1.36
Col9a1Q05722 Gm7407-201ENSMUST00000208301 568 ntBASIC6.56□□□□□ -1.36
Col9a1Q05722 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC6.56□□□□□ -1.36
Col9a1Q05722 AC161884.2-201ENSMUST00000224513 227 ntBASIC6.56□□□□□ -1.36
Col9a1Q05722 AC166105.1-201ENSMUST00000227512 482 ntBASIC6.56□□□□□ -1.36
Col9a1Q05722 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col9a1Q05722 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
Col9a1Q05722 Gm22704-201ENSMUST00000083027 137 ntBASIC6.56□□□□□ -1.36
Col9a1Q05722 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col9a1Q05722 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col9a1Q05722 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col9a1Q05722 Gm18852-201ENSMUST00000184149 3593 ntBASIC6.56□□□□□ -1.36
Col9a1Q05722 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col9a1Q05722 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col9a1Q05722 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col9a1Q05722 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col9a1Q05722 Gm37527-201ENSMUST00000192406 3547 ntBASIC6.56□□□□□ -1.36
Col9a1Q05722 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col9a1Q05722 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col9a1Q05722 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col9a1Q05722 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Col9a1Q05722 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col9a1Q05722 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Col9a1Q05722 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC6.56□□□□□ -1.36
Col9a1Q05722 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Col9a1Q05722 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC6.56□□□□□ -1.36
Col9a1Q05722 Gm37138-201ENSMUST00000194564 2089 ntBASIC6.56□□□□□ -1.36
Col9a1Q05722 AC130219.1-201ENSMUST00000228406 3433 ntBASIC6.56□□□□□ -1.36
Col9a1Q05722 Iqch-206ENSMUST00000171243 3099 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Col9a1Q05722 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col9a1Q05722 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Col9a1Q05722 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col9a1Q05722 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col9a1Q05722 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Col9a1Q05722 Gm37767-201ENSMUST00000193239 1834 ntBASIC6.55□□□□□ -1.36
Col9a1Q05722 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Col9a1Q05722 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.55□□□□□ -1.36
Col9a1Q05722 Gm42681-201ENSMUST00000197999 1611 ntBASIC6.55□□□□□ -1.36
Col9a1Q05722 Gm43333-201ENSMUST00000198340 2262 ntBASIC6.55□□□□□ -1.36
Col9a1Q05722 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col9a1Q05722 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col9a1Q05722 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Col9a1Q05722 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col9a1Q05722 Gm11698-201ENSMUST00000117948 455 ntBASIC6.55□□□□□ -1.36
Col9a1Q05722 Gm13983-201ENSMUST00000118018 865 ntBASIC6.55□□□□□ -1.36
Col9a1Q05722 Gm13469-201ENSMUST00000118231 350 ntBASIC6.55□□□□□ -1.36
Col9a1Q05722 Gm13755-201ENSMUST00000118509 305 ntBASIC6.55□□□□□ -1.36
Col9a1Q05722 Gm12417-201ENSMUST00000119153 403 ntBASIC6.55□□□□□ -1.36
Col9a1Q05722 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC6.55□□□□□ -1.36
Col9a1Q05722 Gm6081-201ENSMUST00000134472 489 ntBASIC6.55□□□□□ -1.36
Col9a1Q05722 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Col9a1Q05722 Mir6899-201ENSMUST00000184798 64 ntBASIC6.55□□□□□ -1.36
Col9a1Q05722 Gm28163-201ENSMUST00000187099 325 ntBASIC6.55□□□□□ -1.36
Col9a1Q05722 Gm44361-201ENSMUST00000197960 94 ntBASIC6.55□□□□□ -1.36
Col9a1Q05722 Gm43561-201ENSMUST00000199866 448 ntBASIC6.55□□□□□ -1.36
Col9a1Q05722 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.55□□□□□ -1.36
Col9a1Q05722 Gm9800-201ENSMUST00000052615 336 ntBASIC6.55□□□□□ -1.36
Col9a1Q05722 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col9a1Q05722 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
Col9a1Q05722 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Col9a1Q05722 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.55□□□□□ -1.36
Col9a1Q05722 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col9a1Q05722 CT025556.1-201ENSMUST00000222965 1884 ntBASIC6.55□□□□□ -1.36
Col9a1Q05722 Gm381-201ENSMUST00000117443 2037 ntBASIC6.55□□□□□ -1.36
Col9a1Q05722 Gm43282-201ENSMUST00000201848 2157 ntBASIC6.55□□□□□ -1.36
Col9a1Q05722 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col9a1Q05722 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col9a1Q05722 Gm29670-201ENSMUST00000190228 2491 ntBASIC6.55□□□□□ -1.36
Col9a1Q05722 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col9a1Q05722 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col9a1Q05722 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col9a1Q05722 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Col9a1Q05722 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col9a1Q05722 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Col9a1Q05722 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Col9a1Q05722 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col9a1Q05722 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col9a1Q05722 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Col9a1Q05722 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 107.5 ms