Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm43669-201ENSMUST00000198229 436 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm9057-201ENSMUST00000198791 296 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm44468-201ENSMUST00000199516 105 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm8041-201ENSMUST00000199755 616 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Col8a1Q00780 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm17999-201ENSMUST00000211568 542 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col8a1Q00780 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm2436-201ENSMUST00000219562 774 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm17890-201ENSMUST00000221419 757 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 AC125539.2-201ENSMUST00000228339 753 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Col8a1Q00780 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
Col8a1Q00780 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col8a1Q00780 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Col8a1Q00780 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm8412-201ENSMUST00000077493 440 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 n-R5s85-201ENSMUST00000083453 113 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Mir129-1-201ENSMUST00000083535 73 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col8a1Q00780 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Col8a1Q00780 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm37132-201ENSMUST00000195553 2238 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm42510-201ENSMUST00000196470 2258 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Col8a1Q00780 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC4.86□□□□□ -1.63
Col8a1Q00780 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col8a1Q00780 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC4.86□□□□□ -1.63
Col8a1Q00780 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col8a1Q00780 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col8a1Q00780 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col8a1Q00780 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Col8a1Q00780 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col8a1Q00780 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Col8a1Q00780 Gm18757-201ENSMUST00000207938 3141 ntBASIC4.86□□□□□ -1.63
Col8a1Q00780 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col8a1Q00780 Gm44068-201ENSMUST00000204049 2128 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Col8a1Q00780 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Col8a1Q00780 Gm37903-201ENSMUST00000192122 2381 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Col8a1Q00780 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Col8a1Q00780 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Col8a1Q00780 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC4.85□□□□□ -1.63
Col8a1Q00780 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Col8a1Q00780 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col8a1Q00780 Gm7108-201ENSMUST00000118038 3407 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Col8a1Q00780 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Col8a1Q00780 Olfr612-201ENSMUST00000104879 972 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Col8a1Q00780 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
Col8a1Q00780 Gm24275-201ENSMUST00000116780 146 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 Gm25316-201ENSMUST00000116826 118 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 Gm11878-201ENSMUST00000117908 400 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 Gm9308-201ENSMUST00000119073 448 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 Gm14472-201ENSMUST00000119815 282 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 Gm6175-201ENSMUST00000121351 400 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 Gm12267-201ENSMUST00000121609 761 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 Gm23327-201ENSMUST00000157420 78 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 Gm24692-201ENSMUST00000157761 146 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 Gm24737-201ENSMUST00000158861 100 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Col8a1Q00780 Gm23141-201ENSMUST00000178682 94 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
Col8a1Q00780 Gm9457-201ENSMUST00000180176 372 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC4.85□□□□□ -1.63
Col8a1Q00780 Nras-ps2-201ENSMUST00000195269 178 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC4.85□□□□□ -1.63
Col8a1Q00780 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Col8a1Q00780 Gm20940-201ENSMUST00000197308 360 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 Gm9173-201ENSMUST00000198054 400 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC4.85□□□□□ -1.63
Col8a1Q00780 Gm19140-201ENSMUST00000209790 421 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 Gm2628-201ENSMUST00000218019 426 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 AC147240.1-201ENSMUST00000218767 431 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 AC153548.2-201ENSMUST00000219770 885 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 AC122905.2-201ENSMUST00000220325 269 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 Gm6171-201ENSMUST00000220760 645 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 AC154257.2-201ENSMUST00000224166 340 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 AC122448.1-201ENSMUST00000226317 772 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 Ear14-201ENSMUST00000049559 468 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Col8a1Q00780 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC4.85□□□□□ -1.63
Col8a1Q00780 Gm7808-201ENSMUST00000082002 387 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Col8a1Q00780 AC154841.1-201ENSMUST00000227263 1479 ntBASIC4.85□□□□□ -1.63
Col8a1Q00780 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Col8a1Q00780 Gm19272-201ENSMUST00000184133 1753 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms