Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SgcbP82349 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SgcbP82349 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC5.36□□□□□ -1.55
SgcbP82349 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.36□□□□□ -1.55
SgcbP82349 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC5.36□□□□□ -1.55
SgcbP82349 Gm28506-201ENSMUST00000189937 150 ntBASIC5.36□□□□□ -1.55
SgcbP82349 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.36□□□□□ -1.55
SgcbP82349 Ighv12-1-201ENSMUST00000195542 329 ntBASIC5.36□□□□□ -1.55
SgcbP82349 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC5.36□□□□□ -1.55
SgcbP82349 Gm35013-201ENSMUST00000197218 832 ntBASIC5.36□□□□□ -1.55
SgcbP82349 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SgcbP82349 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC5.36□□□□□ -1.55
SgcbP82349 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SgcbP82349 Gm44239-201ENSMUST00000204228 271 ntBASIC5.36□□□□□ -1.55
SgcbP82349 Gm9278-201ENSMUST00000205508 553 ntBASIC5.36□□□□□ -1.55
SgcbP82349 Gm45387-201ENSMUST00000209792 632 ntBASIC5.36□□□□□ -1.55
SgcbP82349 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC5.36□□□□□ -1.55
SgcbP82349 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC5.36□□□□□ -1.55
SgcbP82349 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SgcbP82349 Gm45910-201ENSMUST00000212493 1003 ntBASIC5.36□□□□□ -1.55
SgcbP82349 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC5.36□□□□□ -1.55
SgcbP82349 AC108846.4-201ENSMUST00000216783 341 ntBASIC5.36□□□□□ -1.55
SgcbP82349 AC125531.1-201ENSMUST00000219849 221 ntBASIC5.36□□□□□ -1.55
SgcbP82349 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC5.36□□□□□ -1.55
SgcbP82349 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SgcbP82349 AC163664.2-201ENSMUST00000228894 459 ntBASIC5.36□□□□□ -1.55
SgcbP82349 Gm5229-201ENSMUST00000039375 354 ntBASIC5.36□□□□□ -1.55
SgcbP82349 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SgcbP82349 Snord42a-201ENSMUST00000082606 65 ntBASIC5.36□□□□□ -1.55
SgcbP82349 Mir194-1-201ENSMUST00000083647 67 ntBASIC5.36□□□□□ -1.55
SgcbP82349 Gm6177-201ENSMUST00000085589 465 ntBASIC5.36□□□□□ -1.55
SgcbP82349 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SgcbP82349 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.36□□□□□ -1.55
SgcbP82349 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SgcbP82349 Gm36947-201ENSMUST00000194709 2249 ntBASIC5.36□□□□□ -1.55
SgcbP82349 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SgcbP82349 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SgcbP82349 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SgcbP82349 Gm37183-201ENSMUST00000191712 3405 ntBASIC5.36□□□□□ -1.55
SgcbP82349 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
SgcbP82349 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SgcbP82349 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SgcbP82349 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SgcbP82349 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
SgcbP82349 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SgcbP82349 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SgcbP82349 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SgcbP82349 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SgcbP82349 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SgcbP82349 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SgcbP82349 Gm43900-201ENSMUST00000204868 2669 ntBASIC5.35□□□□□ -1.55
SgcbP82349 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SgcbP82349 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SgcbP82349 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SgcbP82349 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SgcbP82349 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SgcbP82349 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SgcbP82349 Gm23440-201ENSMUST00000104299 130 ntBASIC5.35□□□□□ -1.55
SgcbP82349 Gm15025-201ENSMUST00000118434 418 ntBASIC5.35□□□□□ -1.55
SgcbP82349 Gm7931-201ENSMUST00000121537 271 ntBASIC5.35□□□□□ -1.55
SgcbP82349 Gm14970-201ENSMUST00000122289 355 ntBASIC5.35□□□□□ -1.55
SgcbP82349 Gm14804-201ENSMUST00000122322 508 ntBASIC5.35□□□□□ -1.55
SgcbP82349 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.35□□□□□ -1.55
SgcbP82349 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC5.35□□□□□ -1.55
SgcbP82349 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC5.35□□□□□ -1.55
SgcbP82349 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC5.35□□□□□ -1.55
SgcbP82349 Gm24435-201ENSMUST00000157886 110 ntBASIC5.35□□□□□ -1.55
SgcbP82349 Gm24767-201ENSMUST00000158509 95 ntBASIC5.35□□□□□ -1.55
SgcbP82349 Gm23050-201ENSMUST00000158775 165 ntBASIC5.35□□□□□ -1.55
SgcbP82349 Gm22530-201ENSMUST00000158820 118 ntBASIC5.35□□□□□ -1.55
SgcbP82349 Gm24735-201ENSMUST00000158859 118 ntBASIC5.35□□□□□ -1.55
SgcbP82349 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.35□□□□□ -1.55
SgcbP82349 Gm26057-201ENSMUST00000178099 165 ntBASIC5.35□□□□□ -1.55
SgcbP82349 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SgcbP82349 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SgcbP82349 Gm29231-201ENSMUST00000179850 319 ntBASIC5.35□□□□□ -1.55
SgcbP82349 Gm5430-201ENSMUST00000182525 915 ntBASIC5.35□□□□□ -1.55
SgcbP82349 Gm28527-201ENSMUST00000185210 297 ntBASIC5.35□□□□□ -1.55
SgcbP82349 Gm37757-201ENSMUST00000193072 210 ntBASIC5.35□□□□□ -1.55
SgcbP82349 Gm38098-201ENSMUST00000194115 241 ntBASIC5.35□□□□□ -1.55
SgcbP82349 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC5.35□□□□□ -1.55
SgcbP82349 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC5.35□□□□□ -1.55
SgcbP82349 Gm18423-201ENSMUST00000205144 1074 ntBASIC5.35□□□□□ -1.55
SgcbP82349 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC5.35□□□□□ -1.55
SgcbP82349 Gm45438-201ENSMUST00000210242 564 ntBASIC5.35□□□□□ -1.55
SgcbP82349 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC5.35□□□□□ -1.55
SgcbP82349 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.35□□□□□ -1.55
SgcbP82349 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.35□□□□□ -1.55
SgcbP82349 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC5.35□□□□□ -1.55
SgcbP82349 Gm2446-201ENSMUST00000220144 772 ntBASIC5.35□□□□□ -1.55
SgcbP82349 Gm3785-201ENSMUST00000221000 202 ntBASIC5.35□□□□□ -1.55
SgcbP82349 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SgcbP82349 CT030182.3-201ENSMUST00000225986 582 ntBASIC5.35□□□□□ -1.55
SgcbP82349 AC155237.2-201ENSMUST00000228487 478 ntBASIC5.35□□□□□ -1.55
SgcbP82349 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
SgcbP82349 Gm8526-201ENSMUST00000079153 475 ntBASIC5.35□□□□□ -1.55
SgcbP82349 Gm25579-201ENSMUST00000083407 106 ntBASIC5.35□□□□□ -1.55
SgcbP82349 Mir412-201ENSMUST00000083636 80 ntBASIC5.35□□□□□ -1.55
SgcbP82349 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SgcbP82349 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms