Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC5.35□□□□□ -1.55
Shmt1P50431 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC5.35□□□□□ -1.55
Shmt1P50431 Gm27820-201ENSMUST00000183628 175 ntBASIC5.35□□□□□ -1.55
Shmt1P50431 Gm28097-201ENSMUST00000187333 366 ntBASIC5.35□□□□□ -1.55
Shmt1P50431 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.35□□□□□ -1.55
Shmt1P50431 Gm28788-201ENSMUST00000189717 375 ntBASIC5.35□□□□□ -1.55
Shmt1P50431 Gm29558-201ENSMUST00000190134 375 ntBASIC5.35□□□□□ -1.55
Shmt1P50431 Gm4322-201ENSMUST00000191094 336 ntBASIC5.35□□□□□ -1.55
Shmt1P50431 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC5.35□□□□□ -1.55
Shmt1P50431 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Shmt1P50431 Gm20940-201ENSMUST00000197308 360 ntBASIC5.35□□□□□ -1.55
Shmt1P50431 Gm43368-201ENSMUST00000200638 409 ntBASIC5.35□□□□□ -1.55
Shmt1P50431 Gm43968-201ENSMUST00000203388 389 ntBASIC5.35□□□□□ -1.55
Shmt1P50431 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Shmt1P50431 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Shmt1P50431 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
Shmt1P50431 Gm5215-201ENSMUST00000054380 405 ntBASIC5.35□□□□□ -1.55
Shmt1P50431 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Shmt1P50431 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Shmt1P50431 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Shmt1P50431 Gm5185-201ENSMUST00000080271 619 ntBASIC5.35□□□□□ -1.55
Shmt1P50431 Gm22977-201ENSMUST00000082615 107 ntBASIC5.35□□□□□ -1.55
Shmt1P50431 Gm23846-201ENSMUST00000083835 107 ntBASIC5.35□□□□□ -1.55
Shmt1P50431 Gm23796-201ENSMUST00000084011 160 ntBASIC5.35□□□□□ -1.55
Shmt1P50431 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
Shmt1P50431 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Shmt1P50431 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.35□□□□□ -1.55
Shmt1P50431 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Shmt1P50431 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.35□□□□□ -1.55
Shmt1P50431 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.34□□□□□ -1.55
Shmt1P50431 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.34□□□□□ -1.55
Shmt1P50431 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Shmt1P50431 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.34□□□□□ -1.55
Shmt1P50431 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Shmt1P50431 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
Shmt1P50431 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Shmt1P50431 Gm22771-201ENSMUST00000104449 91 ntBASIC5.34□□□□□ -1.55
Shmt1P50431 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Shmt1P50431 Gm15385-201ENSMUST00000118725 667 ntBASIC5.34□□□□□ -1.55
Shmt1P50431 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC5.34□□□□□ -1.55
Shmt1P50431 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC5.34□□□□□ -1.55
Shmt1P50431 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC5.34□□□□□ -1.55
Shmt1P50431 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Shmt1P50431 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC5.34□□□□□ -1.55
Shmt1P50431 Mir5128-201ENSMUST00000175217 84 ntBASIC5.34□□□□□ -1.55
Shmt1P50431 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC5.34□□□□□ -1.55
Shmt1P50431 Mir6411-201ENSMUST00000183556 108 ntBASIC5.34□□□□□ -1.55
Shmt1P50431 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC5.34□□□□□ -1.55
Shmt1P50431 Gm42958-201ENSMUST00000197595 318 ntBASIC5.34□□□□□ -1.55
Shmt1P50431 Gm43344-201ENSMUST00000198723 1229 ntBASIC5.34□□□□□ -1.55
Shmt1P50431 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.34□□□□□ -1.55
Shmt1P50431 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.34□□□□□ -1.55
Shmt1P50431 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.34□□□□□ -1.55
Shmt1P50431 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC5.34□□□□□ -1.55
Shmt1P50431 AC141642.1-201ENSMUST00000220598 229 ntBASIC5.34□□□□□ -1.55
Shmt1P50431 AC167977.1-201ENSMUST00000221384 234 ntBASIC5.34□□□□□ -1.55
Shmt1P50431 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Shmt1P50431 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC5.34□□□□□ -1.55
Shmt1P50431 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Shmt1P50431 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
Shmt1P50431 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
Shmt1P50431 Gm23626-201ENSMUST00000082458 133 ntBASIC5.34□□□□□ -1.55
Shmt1P50431 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC5.34□□□□□ -1.55
Shmt1P50431 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC5.34□□□□□ -1.55
Shmt1P50431 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Shmt1P50431 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Shmt1P50431 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Shmt1P50431 Gm37767-201ENSMUST00000193239 1834 ntBASIC5.34□□□□□ -1.55
Shmt1P50431 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Shmt1P50431 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Shmt1P50431 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
Shmt1P50431 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Shmt1P50431 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Shmt1P50431 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.33□□□□□ -1.56
Shmt1P50431 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Shmt1P50431 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Shmt1P50431 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.33□□□□□ -1.56
Shmt1P50431 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
Shmt1P50431 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
Shmt1P50431 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Shmt1P50431 Gm42598-201ENSMUST00000200110 2437 ntBASIC5.33□□□□□ -1.56
Shmt1P50431 Vmn1r171-210ENSMUST00000228484 2421 ntAPPRIS ALT2 BASIC5.33□□□□□ -1.56
Shmt1P50431 Gm42967-201ENSMUST00000198647 2312 ntBASIC5.33□□□□□ -1.56
Shmt1P50431 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Shmt1P50431 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Shmt1P50431 Olfr328-202ENSMUST00000108824 1199 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Shmt1P50431 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.33□□□□□ -1.56
Shmt1P50431 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Shmt1P50431 Gm11410-201ENSMUST00000120053 1143 ntBASIC5.33□□□□□ -1.56
Shmt1P50431 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC5.33□□□□□ -1.56
Shmt1P50431 Gm12854-201ENSMUST00000128518 297 ntBASIC5.33□□□□□ -1.56
Shmt1P50431 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Shmt1P50431 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Shmt1P50431 Gm23981-201ENSMUST00000157136 106 ntBASIC5.33□□□□□ -1.56
Shmt1P50431 Gm23534-201ENSMUST00000157539 97 ntBASIC5.33□□□□□ -1.56
Shmt1P50431 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Shmt1P50431 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC5.33□□□□□ -1.56
Shmt1P50431 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC5.33□□□□□ -1.56
Shmt1P50431 Gm26365-201ENSMUST00000179177 94 ntBASIC5.33□□□□□ -1.56
Shmt1P50431 Gm27919-201ENSMUST00000185163 107 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms