Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Rfx1P48377 Mir6911-201ENSMUST00000184241 69 ntBASIC6.57□□□□□ -1.36
Rfx1P48377 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Rfx1P48377 Gm29335-201ENSMUST00000188361 459 ntBASIC6.57□□□□□ -1.36
Rfx1P48377 Gm18291-201ENSMUST00000190791 301 ntBASIC6.57□□□□□ -1.36
Rfx1P48377 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC6.57□□□□□ -1.36
Rfx1P48377 Gm37399-201ENSMUST00000195224 416 ntBASIC6.57□□□□□ -1.36
Rfx1P48377 AC117240.1-201ENSMUST00000199436 61 ntBASIC6.57□□□□□ -1.36
Rfx1P48377 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC6.57□□□□□ -1.36
Rfx1P48377 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC6.57□□□□□ -1.36
Rfx1P48377 Gm44214-201ENSMUST00000204153 606 ntBASIC6.57□□□□□ -1.36
Rfx1P48377 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC6.57□□□□□ -1.36
Rfx1P48377 Gm2926-201ENSMUST00000205625 239 ntBASIC6.57□□□□□ -1.36
Rfx1P48377 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC6.57□□□□□ -1.36
Rfx1P48377 Gm19921-201ENSMUST00000210505 703 ntBASIC6.57□□□□□ -1.36
Rfx1P48377 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC6.57□□□□□ -1.36
Rfx1P48377 Gm45727-201ENSMUST00000212886 572 ntBASIC6.57□□□□□ -1.36
Rfx1P48377 AC124445.1-201ENSMUST00000218613 452 ntBASIC6.57□□□□□ -1.36
Rfx1P48377 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC6.57□□□□□ -1.36
Rfx1P48377 AC154224.1-201ENSMUST00000224367 403 ntBASIC6.57□□□□□ -1.36
Rfx1P48377 Gm23939-201ENSMUST00000082880 133 ntBASIC6.57□□□□□ -1.36
Rfx1P48377 Gm23378-201ENSMUST00000082942 107 ntBASIC6.57□□□□□ -1.36
Rfx1P48377 Vaultrc5-201ENSMUST00000083211 143 ntBASIC6.57□□□□□ -1.36
Rfx1P48377 Gm24610-201ENSMUST00000083270 109 ntBASIC6.57□□□□□ -1.36
Rfx1P48377 Gm24454-201ENSMUST00000083349 132 ntBASIC6.57□□□□□ -1.36
Rfx1P48377 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC6.57□□□□□ -1.36
Rfx1P48377 Gm44587-201ENSMUST00000207399 1685 ntBASIC6.57□□□□□ -1.36
Rfx1P48377 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rfx1P48377 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Rfx1P48377 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Rfx1P48377 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
Rfx1P48377 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Rfx1P48377 Slco1a5-203ENSMUST00000111825 2586 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Rfx1P48377 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Rfx1P48377 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rfx1P48377 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rfx1P48377 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
Rfx1P48377 Gm38128-201ENSMUST00000192085 3250 ntBASIC6.56□□□□□ -1.36
Rfx1P48377 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rfx1P48377 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rfx1P48377 Gm42686-201ENSMUST00000199172 4108 ntBASIC6.56□□□□□ -1.36
Rfx1P48377 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Rfx1P48377 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Rfx1P48377 Gm24265-201ENSMUST00000101833 141 ntBASIC6.56□□□□□ -1.36
Rfx1P48377 Gm15951-201ENSMUST00000118377 400 ntBASIC6.56□□□□□ -1.36
Rfx1P48377 Gm13627-201ENSMUST00000119700 706 ntBASIC6.56□□□□□ -1.36
Rfx1P48377 Gm14392-201ENSMUST00000120332 401 ntBASIC6.56□□□□□ -1.36
Rfx1P48377 Gm15166-201ENSMUST00000120790 385 ntBASIC6.56□□□□□ -1.36
Rfx1P48377 Gm22345-201ENSMUST00000122644 107 ntBASIC6.56□□□□□ -1.36
Rfx1P48377 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Rfx1P48377 Gm25670-201ENSMUST00000178423 107 ntBASIC6.56□□□□□ -1.36
Rfx1P48377 Gm26239-201ENSMUST00000178842 107 ntBASIC6.56□□□□□ -1.36
Rfx1P48377 Gm24267-201ENSMUST00000179841 107 ntBASIC6.56□□□□□ -1.36
Rfx1P48377 Gm7745-201ENSMUST00000182235 973 ntBASIC6.56□□□□□ -1.36
Rfx1P48377 Gm29509-201ENSMUST00000185716 321 ntBASIC6.56□□□□□ -1.36
Rfx1P48377 Gm28666-201ENSMUST00000186649 274 ntBASIC6.56□□□□□ -1.36
Rfx1P48377 Gm10193-201ENSMUST00000188288 231 ntBASIC6.56□□□□□ -1.36
Rfx1P48377 Gm8419-201ENSMUST00000189886 412 ntBASIC6.56□□□□□ -1.36
Rfx1P48377 Ighv1-14-201ENSMUST00000194015 402 ntBASIC6.56□□□□□ -1.36
Rfx1P48377 Gm43214-201ENSMUST00000199242 352 ntBASIC6.56□□□□□ -1.36
Rfx1P48377 Gm6520-201ENSMUST00000200636 410 ntBASIC6.56□□□□□ -1.36
Rfx1P48377 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC6.56□□□□□ -1.36
Rfx1P48377 Olfr936-202ENSMUST00000216912 937 ntBASIC6.56□□□□□ -1.36
Rfx1P48377 AC164618.1-201ENSMUST00000225769 592 ntBASIC6.56□□□□□ -1.36
Rfx1P48377 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Rfx1P48377 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rfx1P48377 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rfx1P48377 Gm24292-201ENSMUST00000082888 107 ntBASIC6.56□□□□□ -1.36
Rfx1P48377 Gm16261-201ENSMUST00000096813 205 ntBASIC6.56□□□□□ -1.36
Rfx1P48377 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Rfx1P48377 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rfx1P48377 Gm37606-201ENSMUST00000191816 3116 ntBASIC6.56□□□□□ -1.36
Rfx1P48377 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rfx1P48377 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Rfx1P48377 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Rfx1P48377 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
Rfx1P48377 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Rfx1P48377 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Rfx1P48377 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Rfx1P48377 AC134596.1-201ENSMUST00000222016 1922 ntBASIC6.55□□□□□ -1.36
Rfx1P48377 AC174459.1-201ENSMUST00000224476 1943 ntBASIC6.55□□□□□ -1.36
Rfx1P48377 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Rfx1P48377 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Rfx1P48377 Gm6175-201ENSMUST00000121351 400 ntBASIC6.55□□□□□ -1.36
Rfx1P48377 Mir1898-201ENSMUST00000122643 83 ntBASIC6.55□□□□□ -1.36
Rfx1P48377 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC6.55□□□□□ -1.36
Rfx1P48377 1600025M17Rik-201ENSMUST00000138262 666 ntTSL 5 BASIC6.55□□□□□ -1.36
Rfx1P48377 Gm25342-201ENSMUST00000157459 122 ntBASIC6.55□□□□□ -1.36
Rfx1P48377 Gm25227-201ENSMUST00000158204 112 ntBASIC6.55□□□□□ -1.36
Rfx1P48377 Gm22765-201ENSMUST00000158371 128 ntBASIC6.55□□□□□ -1.36
Rfx1P48377 Gm23149-201ENSMUST00000158837 230 ntBASIC6.55□□□□□ -1.36
Rfx1P48377 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC6.55□□□□□ -1.36
Rfx1P48377 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC6.55□□□□□ -1.36
Rfx1P48377 Gm27512-201ENSMUST00000175328 126 ntBASIC6.55□□□□□ -1.36
Rfx1P48377 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC6.55□□□□□ -1.36
Rfx1P48377 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC6.55□□□□□ -1.36
Rfx1P48377 Gm29201-201ENSMUST00000189120 431 ntBASIC6.55□□□□□ -1.36
Rfx1P48377 Gm4322-201ENSMUST00000191094 336 ntBASIC6.55□□□□□ -1.36
Rfx1P48377 Ighv3-7-201ENSMUST00000193370 348 ntBASIC6.55□□□□□ -1.36
Rfx1P48377 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms