Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
Cxcl12P40224 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Cxcl12P40224 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.27□□□□□ -1.73
Cxcl12P40224 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Cxcl12P40224 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Cxcl12P40224 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC4.27□□□□□ -1.73
Cxcl12P40224 Gm10241-201ENSMUST00000117664 286 ntBASIC4.27□□□□□ -1.73
Cxcl12P40224 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC4.27□□□□□ -1.73
Cxcl12P40224 Gm14383-201ENSMUST00000121637 386 ntBASIC4.27□□□□□ -1.73
Cxcl12P40224 Gm24382-201ENSMUST00000122698 107 ntBASIC4.27□□□□□ -1.73
Cxcl12P40224 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC4.27□□□□□ -1.73
Cxcl12P40224 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Cxcl12P40224 Gm23115-201ENSMUST00000158480 108 ntBASIC4.27□□□□□ -1.73
Cxcl12P40224 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC4.27□□□□□ -1.73
Cxcl12P40224 Gm22398-201ENSMUST00000174941 125 ntBASIC4.27□□□□□ -1.73
Cxcl12P40224 Gm25731-201ENSMUST00000175167 125 ntBASIC4.27□□□□□ -1.73
Cxcl12P40224 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Cxcl12P40224 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.27□□□□□ -1.73
Cxcl12P40224 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC4.27□□□□□ -1.73
Cxcl12P40224 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Cxcl12P40224 Gm8874-201ENSMUST00000196826 286 ntBASIC4.27□□□□□ -1.73
Cxcl12P40224 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Cxcl12P40224 Gm3829-201ENSMUST00000222362 619 ntBASIC4.27□□□□□ -1.73
Cxcl12P40224 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Cxcl12P40224 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Cxcl12P40224 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC4.27□□□□□ -1.73
Cxcl12P40224 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
Cxcl12P40224 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.27□□□□□ -1.73
Cxcl12P40224 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.27□□□□□ -1.73
Cxcl12P40224 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Cxcl12P40224 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Cxcl12P40224 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Cxcl12P40224 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
Cxcl12P40224 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.26□□□□□ -1.73
Cxcl12P40224 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.26□□□□□ -1.73
Cxcl12P40224 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cxcl12P40224 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Cxcl12P40224 Gm13771-201ENSMUST00000117988 238 ntBASIC4.26□□□□□ -1.73
Cxcl12P40224 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.26□□□□□ -1.73
Cxcl12P40224 Gm11403-201ENSMUST00000122195 369 ntBASIC4.26□□□□□ -1.73
Cxcl12P40224 Gm23667-201ENSMUST00000157466 120 ntBASIC4.26□□□□□ -1.73
Cxcl12P40224 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC4.26□□□□□ -1.73
Cxcl12P40224 Gm19637-201ENSMUST00000185933 579 ntBASIC4.26□□□□□ -1.73
Cxcl12P40224 Gm28660-201ENSMUST00000186496 253 ntBASIC4.26□□□□□ -1.73
Cxcl12P40224 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cxcl12P40224 Gm42566-201ENSMUST00000197120 643 ntBASIC4.26□□□□□ -1.73
Cxcl12P40224 Gm43596-201ENSMUST00000202818 884 ntBASIC4.26□□□□□ -1.73
Cxcl12P40224 Gm7946-201ENSMUST00000203326 958 ntBASIC4.26□□□□□ -1.73
Cxcl12P40224 Gm6240-201ENSMUST00000208014 473 ntBASIC4.26□□□□□ -1.73
Cxcl12P40224 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Cxcl12P40224 Gm22739-201ENSMUST00000083437 160 ntBASIC4.26□□□□□ -1.73
Cxcl12P40224 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
Cxcl12P40224 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Cxcl12P40224 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Cxcl12P40224 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Cxcl12P40224 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Cxcl12P40224 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Cxcl12P40224 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Cxcl12P40224 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Cxcl12P40224 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Cxcl12P40224 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Cxcl12P40224 Gm3972-201ENSMUST00000173960 2861 ntBASIC4.25□□□□□ -1.73
Cxcl12P40224 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC4.25□□□□□ -1.73
Cxcl12P40224 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.25□□□□□ -1.73
Cxcl12P40224 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Cxcl12P40224 Gm24541-201ENSMUST00000103871 96 ntBASIC4.25□□□□□ -1.73
Cxcl12P40224 Gm22590-201ENSMUST00000104247 128 ntBASIC4.25□□□□□ -1.73
Cxcl12P40224 Gm15553-201ENSMUST00000118757 430 ntBASIC4.25□□□□□ -1.73
Cxcl12P40224 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Cxcl12P40224 Gm12067-201ENSMUST00000119755 1148 ntBASIC4.25□□□□□ -1.73
Cxcl12P40224 Gm3788-201ENSMUST00000119949 136 ntBASIC4.25□□□□□ -1.73
Cxcl12P40224 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC4.25□□□□□ -1.73
Cxcl12P40224 Gm13440-201ENSMUST00000121665 496 ntBASIC4.25□□□□□ -1.73
Cxcl12P40224 Gm12276-201ENSMUST00000121709 301 ntBASIC4.25□□□□□ -1.73
Cxcl12P40224 Gm25105-201ENSMUST00000122477 130 ntBASIC4.25□□□□□ -1.73
Cxcl12P40224 Gm22514-201ENSMUST00000122547 308 ntBASIC4.25□□□□□ -1.73
Cxcl12P40224 Gm16545-201ENSMUST00000161968 463 ntBASIC4.25□□□□□ -1.73
Cxcl12P40224 Gm4540-201ENSMUST00000170669 429 ntBASIC4.25□□□□□ -1.73
Cxcl12P40224 Gm17711-201ENSMUST00000172028 237 ntBASIC4.25□□□□□ -1.73
Cxcl12P40224 Gm4479-201ENSMUST00000178807 171 ntBASIC4.25□□□□□ -1.73
Cxcl12P40224 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Cxcl12P40224 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Cxcl12P40224 Gm27392-201ENSMUST00000185041 101 ntBASIC4.25□□□□□ -1.73
Cxcl12P40224 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC4.25□□□□□ -1.73
Cxcl12P40224 Gm18350-201ENSMUST00000187395 955 ntBASIC4.25□□□□□ -1.73
Cxcl12P40224 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Cxcl12P40224 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Cxcl12P40224 Gm29747-201ENSMUST00000194764 585 ntBASIC4.25□□□□□ -1.73
Cxcl12P40224 Gm4644-201ENSMUST00000197587 400 ntBASIC4.25□□□□□ -1.73
Cxcl12P40224 Gm42458-201ENSMUST00000201914 369 ntBASIC4.25□□□□□ -1.73
Cxcl12P40224 Gm18482-201ENSMUST00000202405 760 ntBASIC4.25□□□□□ -1.73
Cxcl12P40224 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Cxcl12P40224 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC4.25□□□□□ -1.73
Cxcl12P40224 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.25□□□□□ -1.73
Cxcl12P40224 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Cxcl12P40224 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC4.25□□□□□ -1.73
Cxcl12P40224 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC4.25□□□□□ -1.73
Cxcl12P40224 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.25□□□□□ -1.73
Cxcl12P40224 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC4.25□□□□□ -1.73
Cxcl12P40224 AC123534.1-201ENSMUST00000224060 656 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms