Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Traf1P39428 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Traf1P39428 Gm23815-201ENSMUST00000083231 107 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Gm23520-201ENSMUST00000093736 107 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Traf1P39428 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Traf1P39428 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Traf1P39428 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Traf1P39428 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Traf1P39428 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Traf1P39428 Gm44224-201ENSMUST00000204131 1463 ntBASIC5.18□□□□□ -1.58
Traf1P39428 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Traf1P39428 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Traf1P39428 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Traf1P39428 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Traf1P39428 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC5.17□□□□□ -1.58
Traf1P39428 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Traf1P39428 Gm12760-201ENSMUST00000117861 482 ntBASIC5.17□□□□□ -1.58
Traf1P39428 Gm12719-201ENSMUST00000118859 241 ntBASIC5.17□□□□□ -1.58
Traf1P39428 Gm15603-201ENSMUST00000119252 492 ntBASIC5.17□□□□□ -1.58
Traf1P39428 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Traf1P39428 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC5.17□□□□□ -1.58
Traf1P39428 Gm22789-201ENSMUST00000157884 130 ntBASIC5.17□□□□□ -1.58
Traf1P39428 Gm25898-201ENSMUST00000158303 106 ntBASIC5.17□□□□□ -1.58
Traf1P39428 Gm4222-201ENSMUST00000165784 470 ntBASIC5.17□□□□□ -1.58
Traf1P39428 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC5.17□□□□□ -1.58
Traf1P39428 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Traf1P39428 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Traf1P39428 Gm21045-201ENSMUST00000183058 1020 ntBASIC5.17□□□□□ -1.58
Traf1P39428 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC5.17□□□□□ -1.58
Traf1P39428 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC5.17□□□□□ -1.58
Traf1P39428 Gm28191-201ENSMUST00000189112 211 ntBASIC5.17□□□□□ -1.58
Traf1P39428 Gm37881-201ENSMUST00000193001 421 ntBASIC5.17□□□□□ -1.58
Traf1P39428 Gm28724-202ENSMUST00000194218 295 ntBASIC5.17□□□□□ -1.58
Traf1P39428 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC5.17□□□□□ -1.58
Traf1P39428 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Traf1P39428 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC5.17□□□□□ -1.58
Traf1P39428 Gm17811-201ENSMUST00000206193 387 ntBASIC5.17□□□□□ -1.58
Traf1P39428 Gm44879-201ENSMUST00000207007 503 ntBASIC5.17□□□□□ -1.58
Traf1P39428 Gm44548-201ENSMUST00000208929 192 ntBASIC5.17□□□□□ -1.58
Traf1P39428 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC5.17□□□□□ -1.58
Traf1P39428 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC5.17□□□□□ -1.58
Traf1P39428 Gm5649-201ENSMUST00000217918 951 ntBASIC5.17□□□□□ -1.58
Traf1P39428 Gm4263-202ENSMUST00000221392 667 ntBASIC5.17□□□□□ -1.58
Traf1P39428 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Traf1P39428 Gm10916-201ENSMUST00000080330 483 ntBASIC5.17□□□□□ -1.58
Traf1P39428 Gm25821-201ENSMUST00000093657 133 ntBASIC5.17□□□□□ -1.58
Traf1P39428 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Traf1P39428 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Traf1P39428 Gm45223-201ENSMUST00000207037 5138 ntBASIC5.17□□□□□ -1.58
Traf1P39428 Gm43605-201ENSMUST00000199663 3426 ntBASIC5.17□□□□□ -1.58
Traf1P39428 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Traf1P39428 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC5.17□□□□□ -1.58
Traf1P39428 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Traf1P39428 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Traf1P39428 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Traf1P39428 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Traf1P39428 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Traf1P39428 Gm29325-201ENSMUST00000190705 2528 ntBASIC5.16□□□□□ -1.58
Traf1P39428 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Traf1P39428 Gm24935-201ENSMUST00000103770 110 ntBASIC5.16□□□□□ -1.58
Traf1P39428 Gm15161-201ENSMUST00000117340 387 ntBASIC5.16□□□□□ -1.58
Traf1P39428 Gm12994-201ENSMUST00000119601 447 ntBASIC5.16□□□□□ -1.58
Traf1P39428 Olfr1081-ps1-201ENSMUST00000120210 945 ntBASIC5.16□□□□□ -1.58
Traf1P39428 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC5.16□□□□□ -1.58
Traf1P39428 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC5.16□□□□□ -1.58
Traf1P39428 Gm14977-201ENSMUST00000121626 812 ntBASIC5.16□□□□□ -1.58
Traf1P39428 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Traf1P39428 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC5.16□□□□□ -1.58
Traf1P39428 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Traf1P39428 Gm22277-201ENSMUST00000157204 277 ntBASIC5.16□□□□□ -1.58
Traf1P39428 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC5.16□□□□□ -1.58
Traf1P39428 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Traf1P39428 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Traf1P39428 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Traf1P39428 Gm38283-201ENSMUST00000193041 695 ntBASIC5.16□□□□□ -1.58
Traf1P39428 Gm43316-201ENSMUST00000197252 1295 ntBASIC5.16□□□□□ -1.58
Traf1P39428 Gm43710-201ENSMUST00000199583 452 ntBASIC5.16□□□□□ -1.58
Traf1P39428 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC5.16□□□□□ -1.58
Traf1P39428 Gm18877-201ENSMUST00000207706 539 ntBASIC5.16□□□□□ -1.58
Traf1P39428 AC153526.4-201ENSMUST00000217713 379 ntBASIC5.16□□□□□ -1.58
Traf1P39428 AC156803.1-201ENSMUST00000224407 820 ntBASIC5.16□□□□□ -1.58
Traf1P39428 AC126253.2-201ENSMUST00000226518 205 ntBASIC5.16□□□□□ -1.58
Traf1P39428 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Traf1P39428 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Traf1P39428 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Traf1P39428 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Traf1P39428 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Traf1P39428 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Traf1P39428 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Traf1P39428 Gm36962-201ENSMUST00000192114 1761 ntBASIC5.16□□□□□ -1.58
Traf1P39428 Gm37303-201ENSMUST00000194202 1559 ntBASIC5.16□□□□□ -1.58
Traf1P39428 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Traf1P39428 Gm7269-201ENSMUST00000210819 1373 ntBASIC5.16□□□□□ -1.58
Traf1P39428 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Traf1P39428 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Traf1P39428 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC5.15□□□□□ -1.58
Traf1P39428 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Traf1P39428 Gm45211-201ENSMUST00000206208 2650 ntBASIC5.15□□□□□ -1.58
Traf1P39428 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC5.15□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms