Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm14591-201ENSMUST00000120407 518 ntBASIC4.61□□□□□ -1.67
Lire1P11260 Gm14037-201ENSMUST00000120576 313 ntBASIC4.61□□□□□ -1.67
Lire1P11260 Gm17014-201ENSMUST00000120765 168 ntBASIC4.61□□□□□ -1.67
Lire1P11260 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC4.61□□□□□ -1.67
Lire1P11260 Gm13232-201ENSMUST00000121816 632 ntBASIC4.61□□□□□ -1.67
Lire1P11260 n-R5s174-201ENSMUST00000122638 121 ntBASIC4.61□□□□□ -1.67
Lire1P11260 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC4.61□□□□□ -1.67
Lire1P11260 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC4.61□□□□□ -1.67
Lire1P11260 Gm25865-201ENSMUST00000158247 104 ntBASIC4.61□□□□□ -1.67
Lire1P11260 Mir1946a-201ENSMUST00000158360 134 ntBASIC4.61□□□□□ -1.67
Lire1P11260 Gm24002-201ENSMUST00000158456 104 ntBASIC4.61□□□□□ -1.67
Lire1P11260 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Lire1P11260 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC4.61□□□□□ -1.67
Lire1P11260 Gm22108-201ENSMUST00000177961 106 ntBASIC4.61□□□□□ -1.67
Lire1P11260 Gm16430-202ENSMUST00000178145 703 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Lire1P11260 Gm24798-201ENSMUST00000179334 106 ntBASIC4.61□□□□□ -1.67
Lire1P11260 Gm16405-202ENSMUST00000180150 703 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Lire1P11260 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC4.61□□□□□ -1.67
Lire1P11260 Rho-205ENSMUST00000203877 939 ntTSL 2 BASIC4.61□□□□□ -1.67
Lire1P11260 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Lire1P11260 Gm44879-201ENSMUST00000207007 503 ntBASIC4.61□□□□□ -1.67
Lire1P11260 Gm44849-201ENSMUST00000207595 484 ntBASIC4.61□□□□□ -1.67
Lire1P11260 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC4.61□□□□□ -1.67
Lire1P11260 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC4.61□□□□□ -1.67
Lire1P11260 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC4.61□□□□□ -1.67
Lire1P11260 Gm46138-201ENSMUST00000215294 426 ntBASIC4.61□□□□□ -1.67
Lire1P11260 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.61□□□□□ -1.67
Lire1P11260 Gm29785-201ENSMUST00000217033 383 ntBASIC4.61□□□□□ -1.67
Lire1P11260 Gm7198-201ENSMUST00000219635 1074 ntBASIC4.61□□□□□ -1.67
Lire1P11260 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.61□□□□□ -1.67
Lire1P11260 Prl7a1-203ENSMUST00000224852 1283 ntBASIC4.61□□□□□ -1.67
Lire1P11260 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Lire1P11260 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC4.61□□□□□ -1.67
Lire1P11260 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Lire1P11260 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Lire1P11260 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
Lire1P11260 Gm23972-201ENSMUST00000083322 165 ntBASIC4.61□□□□□ -1.67
Lire1P11260 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Lire1P11260 Gm14421-201ENSMUST00000121755 1958 ntBASIC4.61□□□□□ -1.67
Lire1P11260 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Lire1P11260 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Lire1P11260 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC4.61□□□□□ -1.67
Lire1P11260 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC4.61□□□□□ -1.67
Lire1P11260 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC4.61□□□□□ -1.67
Lire1P11260 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC4.61□□□□□ -1.67
Lire1P11260 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC4.61□□□□□ -1.67
Lire1P11260 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC4.61□□□□□ -1.67
Lire1P11260 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC4.61□□□□□ -1.67
Lire1P11260 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.61□□□□□ -1.67
Lire1P11260 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.61□□□□□ -1.67
Lire1P11260 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.61□□□□□ -1.67
Lire1P11260 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.61□□□□□ -1.67
Lire1P11260 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Lire1P11260 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Lire1P11260 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Lire1P11260 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.6□□□□□ -1.67
Lire1P11260 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.6□□□□□ -1.67
Lire1P11260 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Lire1P11260 Gm23256-201ENSMUST00000102235 110 ntBASIC4.6□□□□□ -1.67
Lire1P11260 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC4.6□□□□□ -1.67
Lire1P11260 Gm26140-201ENSMUST00000103807 110 ntBASIC4.6□□□□□ -1.67
Lire1P11260 Gm25418-201ENSMUST00000104214 129 ntBASIC4.6□□□□□ -1.67
Lire1P11260 Gm13195-201ENSMUST00000117229 261 ntBASIC4.6□□□□□ -1.67
Lire1P11260 Gm12717-201ENSMUST00000118427 983 ntBASIC4.6□□□□□ -1.67
Lire1P11260 Gm16100-201ENSMUST00000120489 231 ntBASIC4.6□□□□□ -1.67
Lire1P11260 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Lire1P11260 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC4.6□□□□□ -1.67
Lire1P11260 Gm22870-201ENSMUST00000157501 112 ntBASIC4.6□□□□□ -1.67
Lire1P11260 Gm23700-201ENSMUST00000158842 102 ntBASIC4.6□□□□□ -1.67
Lire1P11260 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Lire1P11260 Gm22908-201ENSMUST00000177620 110 ntBASIC4.6□□□□□ -1.67
Lire1P11260 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.6□□□□□ -1.67
Lire1P11260 Gm8614-201ENSMUST00000182528 978 ntBASIC4.6□□□□□ -1.67
Lire1P11260 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC4.6□□□□□ -1.67
Lire1P11260 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Lire1P11260 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC4.6□□□□□ -1.67
Lire1P11260 Gm28788-201ENSMUST00000189717 375 ntBASIC4.6□□□□□ -1.67
Lire1P11260 Gm29558-201ENSMUST00000190134 375 ntBASIC4.6□□□□□ -1.67
Lire1P11260 Gm29097-201ENSMUST00000190273 422 ntBASIC4.6□□□□□ -1.67
Lire1P11260 Gm5552-201ENSMUST00000197149 515 ntBASIC4.6□□□□□ -1.67
Lire1P11260 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Lire1P11260 Gm6112-201ENSMUST00000208037 629 ntBASIC4.6□□□□□ -1.67
Lire1P11260 Gm34272-201ENSMUST00000208886 253 ntBASIC4.6□□□□□ -1.67
Lire1P11260 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC4.6□□□□□ -1.67
Lire1P11260 Gm8249-201ENSMUST00000219225 465 ntBASIC4.6□□□□□ -1.67
Lire1P11260 Gm8274-201ENSMUST00000219820 463 ntBASIC4.6□□□□□ -1.67
Lire1P11260 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC4.6□□□□□ -1.67
Lire1P11260 AC124524.2-201ENSMUST00000223940 588 ntBASIC4.6□□□□□ -1.67
Lire1P11260 AC156803.1-201ENSMUST00000224407 820 ntBASIC4.6□□□□□ -1.67
Lire1P11260 AC116395.1-201ENSMUST00000225480 1143 ntBASIC4.6□□□□□ -1.67
Lire1P11260 AC154239.1-201ENSMUST00000228565 406 ntBASIC4.6□□□□□ -1.67
Lire1P11260 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Lire1P11260 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
Lire1P11260 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC4.6□□□□□ -1.67
Lire1P11260 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Lire1P11260 Gm26449-201ENSMUST00000082452 104 ntBASIC4.6□□□□□ -1.67
Lire1P11260 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Lire1P11260 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Lire1P11260 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
Lire1P11260 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms