Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 AC154484.1-201ENSMUST00000227311 771 ntBASIC5□□□□□ -1.61
Col3a1P08121 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col3a1P08121 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col3a1P08121 Ehf-201ENSMUST00000090475 4469 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col3a1P08121 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col3a1P08121 Fbxw23-202ENSMUST00000198480 1388 ntBASIC4.99□□□□□ -1.61
Col3a1P08121 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
Col3a1P08121 Gm43260-201ENSMUST00000197378 2430 ntBASIC4.99□□□□□ -1.61
Col3a1P08121 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col3a1P08121 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col3a1P08121 Gm26418-201ENSMUST00000104275 137 ntBASIC4.99□□□□□ -1.61
Col3a1P08121 Gm15313-201ENSMUST00000119179 282 ntBASIC4.99□□□□□ -1.61
Col3a1P08121 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col3a1P08121 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC4.99□□□□□ -1.61
Col3a1P08121 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col3a1P08121 Mir1251-201ENSMUST00000175486 84 ntBASIC4.99□□□□□ -1.61
Col3a1P08121 Gm27254-201ENSMUST00000183926 517 ntBASIC4.99□□□□□ -1.61
Col3a1P08121 Gm29588-201ENSMUST00000185738 298 ntBASIC4.99□□□□□ -1.61
Col3a1P08121 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC4.99□□□□□ -1.61
Col3a1P08121 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Col3a1P08121 Gm29668-201ENSMUST00000187802 315 ntBASIC4.99□□□□□ -1.61
Col3a1P08121 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col3a1P08121 AC132237.2-201ENSMUST00000221702 1209 ntBASIC4.99□□□□□ -1.61
Col3a1P08121 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC4.99□□□□□ -1.61
Col3a1P08121 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC4.99□□□□□ -1.61
Col3a1P08121 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.99□□□□□ -1.61
Col3a1P08121 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col3a1P08121 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC4.99□□□□□ -1.61
Col3a1P08121 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Col3a1P08121 Gm22868-201ENSMUST00000083955 164 ntBASIC4.99□□□□□ -1.61
Col3a1P08121 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Col3a1P08121 Gm45149-201ENSMUST00000206459 2172 ntBASIC4.99□□□□□ -1.61
Col3a1P08121 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC4.98□□□□□ -1.61
Col3a1P08121 Gm37930-201ENSMUST00000194308 1886 ntBASIC4.98□□□□□ -1.61
Col3a1P08121 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
Col3a1P08121 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC4.98□□□□□ -1.61
Col3a1P08121 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col3a1P08121 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC4.98□□□□□ -1.61
Col3a1P08121 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col3a1P08121 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Col3a1P08121 Mir690-201ENSMUST00000102110 109 ntBASIC4.98□□□□□ -1.61
Col3a1P08121 Gm12757-201ENSMUST00000119465 800 ntBASIC4.98□□□□□ -1.61
Col3a1P08121 Gm5060-201ENSMUST00000120072 599 ntBASIC4.98□□□□□ -1.61
Col3a1P08121 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC4.98□□□□□ -1.61
Col3a1P08121 Gm7618-201ENSMUST00000121643 171 ntBASIC4.98□□□□□ -1.61
Col3a1P08121 Gm12693-201ENSMUST00000121965 483 ntBASIC4.98□□□□□ -1.61
Col3a1P08121 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC4.98□□□□□ -1.61
Col3a1P08121 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
Col3a1P08121 Mir669a-7-201ENSMUST00000180364 87 ntBASIC4.98□□□□□ -1.61
Col3a1P08121 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Col3a1P08121 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Col3a1P08121 Gm38268-201ENSMUST00000195813 193 ntBASIC4.98□□□□□ -1.61
Col3a1P08121 Mir669a-6-201ENSMUST00000196127 87 ntBASIC4.98□□□□□ -1.61
Col3a1P08121 Mir669a-12-201ENSMUST00000197274 87 ntBASIC4.98□□□□□ -1.61
Col3a1P08121 Mir669a-5-201ENSMUST00000197439 87 ntBASIC4.98□□□□□ -1.61
Col3a1P08121 Mir669a-10-201ENSMUST00000197745 87 ntBASIC4.98□□□□□ -1.61
Col3a1P08121 Mir669a-11-201ENSMUST00000197952 87 ntBASIC4.98□□□□□ -1.61
Col3a1P08121 Mir669a-4-201ENSMUST00000198665 87 ntBASIC4.98□□□□□ -1.61
Col3a1P08121 Mir669a-9-201ENSMUST00000200087 87 ntBASIC4.98□□□□□ -1.61
Col3a1P08121 Mir669a-8-201ENSMUST00000200268 87 ntBASIC4.98□□□□□ -1.61
Col3a1P08121 Gm44099-201ENSMUST00000203299 112 ntBASIC4.98□□□□□ -1.61
Col3a1P08121 AC124569.4-201ENSMUST00000223830 1220 ntBASIC4.98□□□□□ -1.61
Col3a1P08121 AC187103.4-202ENSMUST00000225091 230 ntBASIC4.98□□□□□ -1.61
Col3a1P08121 AC131117.1-201ENSMUST00000225154 1171 ntBASIC4.98□□□□□ -1.61
Col3a1P08121 AC100733.1-201ENSMUST00000228494 407 ntBASIC4.98□□□□□ -1.61
Col3a1P08121 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.98□□□□□ -1.61
Col3a1P08121 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col3a1P08121 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col3a1P08121 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col3a1P08121 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col3a1P08121 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC4.97□□□□□ -1.61
Col3a1P08121 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.97□□□□□ -1.61
Col3a1P08121 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col3a1P08121 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Col3a1P08121 Mir669p-2-201ENSMUST00000103868 87 ntBASIC4.97□□□□□ -1.61
Col3a1P08121 Mir669p-1-201ENSMUST00000103884 87 ntBASIC4.97□□□□□ -1.61
Col3a1P08121 Gm12683-201ENSMUST00000117528 415 ntBASIC4.97□□□□□ -1.61
Col3a1P08121 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col3a1P08121 Gm6079-201ENSMUST00000121356 404 ntBASIC4.97□□□□□ -1.61
Col3a1P08121 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Col3a1P08121 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC4.97□□□□□ -1.61
Col3a1P08121 Gm23121-201ENSMUST00000157653 173 ntBASIC4.97□□□□□ -1.61
Col3a1P08121 Gm24241-201ENSMUST00000157787 145 ntBASIC4.97□□□□□ -1.61
Col3a1P08121 Gm24553-201ENSMUST00000158653 131 ntBASIC4.97□□□□□ -1.61
Col3a1P08121 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col3a1P08121 Gm28660-201ENSMUST00000186496 253 ntBASIC4.97□□□□□ -1.61
Col3a1P08121 Gm6075-201ENSMUST00000186816 486 ntBASIC4.97□□□□□ -1.61
Col3a1P08121 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col3a1P08121 Gm37416-201ENSMUST00000193596 318 ntBASIC4.97□□□□□ -1.61
Col3a1P08121 Gm7299-201ENSMUST00000194441 581 ntBASIC4.97□□□□□ -1.61
Col3a1P08121 Gm2314-201ENSMUST00000200391 586 ntBASIC4.97□□□□□ -1.61
Col3a1P08121 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC4.97□□□□□ -1.61
Col3a1P08121 Gm44712-201ENSMUST00000206250 1076 ntBASIC4.97□□□□□ -1.61
Col3a1P08121 CT030184.2-201ENSMUST00000223064 263 ntBASIC4.97□□□□□ -1.61
Col3a1P08121 AC134335.1-201ENSMUST00000227626 329 ntBASIC4.97□□□□□ -1.61
Col3a1P08121 AC137950.3-201ENSMUST00000228250 246 ntBASIC4.97□□□□□ -1.61
Col3a1P08121 Gtpbp8-201ENSMUST00000023348 836 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col3a1P08121 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC4.97□□□□□ -1.61
Col3a1P08121 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col3a1P08121 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms