Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC3.28□□□□□ -1.88
Hmgb3O54879 Gm22135-201ENSMUST00000158752 108 ntBASIC3.28□□□□□ -1.88
Hmgb3O54879 Gm3191-201ENSMUST00000167139 346 ntBASIC3.28□□□□□ -1.88
Hmgb3O54879 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Hmgb3O54879 Gm24300-201ENSMUST00000177809 109 ntBASIC3.28□□□□□ -1.88
Hmgb3O54879 Gm24017-201ENSMUST00000178726 109 ntBASIC3.28□□□□□ -1.88
Hmgb3O54879 Gm23952-201ENSMUST00000179380 109 ntBASIC3.28□□□□□ -1.88
Hmgb3O54879 Gm8604-201ENSMUST00000183150 965 ntBASIC3.28□□□□□ -1.88
Hmgb3O54879 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Hmgb3O54879 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC3.28□□□□□ -1.88
Hmgb3O54879 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.28□□□□□ -1.88
Hmgb3O54879 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Hmgb3O54879 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.28□□□□□ -1.88
Hmgb3O54879 Gm44371-201ENSMUST00000204148 467 ntBASIC3.28□□□□□ -1.88
Hmgb3O54879 Gm5358-201ENSMUST00000212814 353 ntBASIC3.28□□□□□ -1.88
Hmgb3O54879 AC153544.1-201ENSMUST00000217988 400 ntBASIC3.28□□□□□ -1.88
Hmgb3O54879 AC127279.1-201ENSMUST00000220140 637 ntBASIC3.28□□□□□ -1.88
Hmgb3O54879 AC133517.1-202ENSMUST00000224409 233 ntBASIC3.28□□□□□ -1.88
Hmgb3O54879 AC166095.1-203ENSMUST00000224591 233 ntBASIC3.28□□□□□ -1.88
Hmgb3O54879 Olfr447-201ENSMUST00000055763 933 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Hmgb3O54879 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Hmgb3O54879 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Hmgb3O54879 Gm22220-201ENSMUST00000082671 149 ntBASIC3.28□□□□□ -1.88
Hmgb3O54879 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.28□□□□□ -1.88
Hmgb3O54879 Gm13230-201ENSMUST00000120870 1575 ntBASIC3.28□□□□□ -1.88
Hmgb3O54879 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Hmgb3O54879 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Hmgb3O54879 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
Hmgb3O54879 Gm11251-201ENSMUST00000119593 2800 ntBASIC3.28□□□□□ -1.88
Hmgb3O54879 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Hmgb3O54879 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Hmgb3O54879 AC140299.2-201ENSMUST00000219546 1969 ntBASIC3.27□□□□□ -1.89
Hmgb3O54879 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Hmgb3O54879 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Hmgb3O54879 Gm13550-201ENSMUST00000118185 525 ntBASIC3.27□□□□□ -1.89
Hmgb3O54879 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Hmgb3O54879 Gm14541-201ENSMUST00000118985 157 ntBASIC3.27□□□□□ -1.89
Hmgb3O54879 Gm14925-201ENSMUST00000120611 438 ntBASIC3.27□□□□□ -1.89
Hmgb3O54879 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Hmgb3O54879 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.27□□□□□ -1.89
Hmgb3O54879 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.27□□□□□ -1.89
Hmgb3O54879 Gm16327-201ENSMUST00000137146 228 ntBASIC3.27□□□□□ -1.89
Hmgb3O54879 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC3.27□□□□□ -1.89
Hmgb3O54879 Gm25278-201ENSMUST00000157267 120 ntBASIC3.27□□□□□ -1.89
Hmgb3O54879 Gm26034-201ENSMUST00000158154 116 ntBASIC3.27□□□□□ -1.89
Hmgb3O54879 Gm23824-201ENSMUST00000158741 276 ntBASIC3.27□□□□□ -1.89
Hmgb3O54879 Gm3091-201ENSMUST00000163408 484 ntBASIC3.27□□□□□ -1.89
Hmgb3O54879 Gm26950-201ENSMUST00000182734 498 ntBASIC3.27□□□□□ -1.89
Hmgb3O54879 Gm4412-201ENSMUST00000186660 433 ntBASIC3.27□□□□□ -1.89
Hmgb3O54879 Gm28920-201ENSMUST00000189957 699 ntBASIC3.27□□□□□ -1.89
Hmgb3O54879 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.27□□□□□ -1.89
Hmgb3O54879 Gm42453-201ENSMUST00000200477 409 ntBASIC3.27□□□□□ -1.89
Hmgb3O54879 Gm19761-201ENSMUST00000205372 391 ntBASIC3.27□□□□□ -1.89
Hmgb3O54879 Gm44703-201ENSMUST00000205724 248 ntBASIC3.27□□□□□ -1.89
Hmgb3O54879 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Hmgb3O54879 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.27□□□□□ -1.89
Hmgb3O54879 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Hmgb3O54879 Gm44946-201ENSMUST00000208425 572 ntBASIC3.27□□□□□ -1.89
Hmgb3O54879 Gm44761-201ENSMUST00000209080 440 ntTSL 2 BASIC3.27□□□□□ -1.89
Hmgb3O54879 AC153800.1-201ENSMUST00000219212 365 ntBASIC3.27□□□□□ -1.89
Hmgb3O54879 Gm29774-201ENSMUST00000219270 436 ntBASIC3.27□□□□□ -1.89
Hmgb3O54879 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.27□□□□□ -1.89
Hmgb3O54879 AC132237.2-201ENSMUST00000221702 1209 ntBASIC3.27□□□□□ -1.89
Hmgb3O54879 Gm6988-201ENSMUST00000222676 375 ntBASIC3.27□□□□□ -1.89
Hmgb3O54879 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC3.27□□□□□ -1.89
Hmgb3O54879 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
Hmgb3O54879 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Hmgb3O54879 Gm23928-201ENSMUST00000082469 145 ntBASIC3.27□□□□□ -1.89
Hmgb3O54879 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Hmgb3O54879 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Hmgb3O54879 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Hmgb3O54879 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Hmgb3O54879 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.27□□□□□ -1.89
Hmgb3O54879 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
Hmgb3O54879 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.27□□□□□ -1.89
Hmgb3O54879 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.27□□□□□ -1.89
Hmgb3O54879 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.27□□□□□ -1.89
Hmgb3O54879 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.27□□□□□ -1.89
Hmgb3O54879 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Hmgb3O54879 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.26□□□□□ -1.89
Hmgb3O54879 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
Hmgb3O54879 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Hmgb3O54879 Gm37124-201ENSMUST00000192140 1992 ntBASIC3.26□□□□□ -1.89
Hmgb3O54879 Gm9427-201ENSMUST00000116187 651 ntBASIC3.26□□□□□ -1.89
Hmgb3O54879 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
Hmgb3O54879 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC3.26□□□□□ -1.89
Hmgb3O54879 Gm12757-201ENSMUST00000119465 800 ntBASIC3.26□□□□□ -1.89
Hmgb3O54879 Gm12237-201ENSMUST00000120158 470 ntBASIC3.26□□□□□ -1.89
Hmgb3O54879 Gm1866-201ENSMUST00000120701 477 ntBASIC3.26□□□□□ -1.89
Hmgb3O54879 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC3.26□□□□□ -1.89
Hmgb3O54879 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
Hmgb3O54879 Gm3757-201ENSMUST00000125878 675 ntBASIC3.26□□□□□ -1.89
Hmgb3O54879 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC3.26□□□□□ -1.89
Hmgb3O54879 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC3.26□□□□□ -1.89
Hmgb3O54879 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Hmgb3O54879 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC3.26□□□□□ -1.89
Hmgb3O54879 Gm25824-201ENSMUST00000157092 121 ntBASIC3.26□□□□□ -1.89
Hmgb3O54879 Gm25150-201ENSMUST00000157121 60 ntBASIC3.26□□□□□ -1.89
Hmgb3O54879 Gm23753-201ENSMUST00000157575 149 ntBASIC3.26□□□□□ -1.89
Hmgb3O54879 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms