Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Gm43856-201ENSMUST00000197004 369 ntBASIC3.38□□□□□ -1.87
Tnfsf11O35235 Gm43930-201ENSMUST00000203868 845 ntBASIC3.38□□□□□ -1.87
Tnfsf11O35235 Gm18007-201ENSMUST00000205019 844 ntBASIC3.38□□□□□ -1.87
Tnfsf11O35235 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC3.38□□□□□ -1.87
Tnfsf11O35235 Gm3690-201ENSMUST00000211341 262 ntBASIC3.38□□□□□ -1.87
Tnfsf11O35235 Gm18645-202ENSMUST00000212222 760 ntBASIC3.38□□□□□ -1.87
Tnfsf11O35235 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Tnfsf11O35235 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC3.38□□□□□ -1.87
Tnfsf11O35235 AC139638.1-201ENSMUST00000218027 364 ntBASIC3.38□□□□□ -1.87
Tnfsf11O35235 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC3.38□□□□□ -1.87
Tnfsf11O35235 Gm18442-201ENSMUST00000220925 639 ntBASIC3.38□□□□□ -1.87
Tnfsf11O35235 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Tnfsf11O35235 AC125399.1-201ENSMUST00000224236 595 ntBASIC3.38□□□□□ -1.87
Tnfsf11O35235 AC154724.1-201ENSMUST00000225782 821 ntBASIC3.38□□□□□ -1.87
Tnfsf11O35235 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Tnfsf11O35235 CT573086.3-201ENSMUST00000228762 594 ntBASIC3.38□□□□□ -1.87
Tnfsf11O35235 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Tnfsf11O35235 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC3.38□□□□□ -1.87
Tnfsf11O35235 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Tnfsf11O35235 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Tnfsf11O35235 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Tnfsf11O35235 Gm7204-201ENSMUST00000062591 600 ntBASIC3.38□□□□□ -1.87
Tnfsf11O35235 Mir188-201ENSMUST00000083464 68 ntBASIC3.38□□□□□ -1.87
Tnfsf11O35235 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC3.38□□□□□ -1.87
Tnfsf11O35235 AC120375.2-201ENSMUST00000226532 1853 ntBASIC3.38□□□□□ -1.87
Tnfsf11O35235 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Tnfsf11O35235 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Tnfsf11O35235 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Tnfsf11O35235 Gm37211-201ENSMUST00000193392 3433 ntBASIC3.38□□□□□ -1.87
Tnfsf11O35235 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
Tnfsf11O35235 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Tnfsf11O35235 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC3.38□□□□□ -1.87
Tnfsf11O35235 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.37□□□□□ -1.87
Tnfsf11O35235 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Tnfsf11O35235 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Tnfsf11O35235 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Tnfsf11O35235 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Tnfsf11O35235 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Tnfsf11O35235 Gm7350-201ENSMUST00000120964 636 ntBASIC3.37□□□□□ -1.87
Tnfsf11O35235 Gm6565-201ENSMUST00000121217 438 ntBASIC3.37□□□□□ -1.87
Tnfsf11O35235 Gm5401-201ENSMUST00000122444 365 ntBASIC3.37□□□□□ -1.87
Tnfsf11O35235 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Tnfsf11O35235 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC3.37□□□□□ -1.87
Tnfsf11O35235 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC3.37□□□□□ -1.87
Tnfsf11O35235 Gm26187-201ENSMUST00000157693 101 ntBASIC3.37□□□□□ -1.87
Tnfsf11O35235 Gm25923-201ENSMUST00000158312 138 ntBASIC3.37□□□□□ -1.87
Tnfsf11O35235 Gm23385-201ENSMUST00000158592 295 ntBASIC3.37□□□□□ -1.87
Tnfsf11O35235 Gm16300-201ENSMUST00000160031 1279 ntBASIC3.37□□□□□ -1.87
Tnfsf11O35235 Gm21850-201ENSMUST00000179792 359 ntBASIC3.37□□□□□ -1.87
Tnfsf11O35235 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC3.37□□□□□ -1.87
Tnfsf11O35235 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC3.37□□□□□ -1.87
Tnfsf11O35235 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC3.37□□□□□ -1.87
Tnfsf11O35235 Gm5511-201ENSMUST00000189380 802 ntBASIC3.37□□□□□ -1.87
Tnfsf11O35235 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Tnfsf11O35235 Vmn1r82-202ENSMUST00000191002 918 ntBASIC3.37□□□□□ -1.87
Tnfsf11O35235 Gm37219-201ENSMUST00000192036 926 ntBASIC3.37□□□□□ -1.87
Tnfsf11O35235 Gm43730-201ENSMUST00000199863 372 ntBASIC3.37□□□□□ -1.87
Tnfsf11O35235 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC3.37□□□□□ -1.87
Tnfsf11O35235 Gm5885-202ENSMUST00000203357 528 ntBASIC3.37□□□□□ -1.87
Tnfsf11O35235 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC3.37□□□□□ -1.87
Tnfsf11O35235 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC3.37□□□□□ -1.87
Tnfsf11O35235 Gm45031-201ENSMUST00000206800 288 ntBASIC3.37□□□□□ -1.87
Tnfsf11O35235 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC3.37□□□□□ -1.87
Tnfsf11O35235 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC3.37□□□□□ -1.87
Tnfsf11O35235 Gm36247-201ENSMUST00000211834 285 ntBASIC3.37□□□□□ -1.87
Tnfsf11O35235 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC3.37□□□□□ -1.87
Tnfsf11O35235 AC140209.1-201ENSMUST00000227875 284 ntBASIC3.37□□□□□ -1.87
Tnfsf11O35235 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Tnfsf11O35235 Olfr844-201ENSMUST00000054106 930 ntBASIC3.37□□□□□ -1.87
Tnfsf11O35235 Mir31-201ENSMUST00000083474 106 ntBASIC3.37□□□□□ -1.87
Tnfsf11O35235 Mir337-201ENSMUST00000083592 97 ntBASIC3.37□□□□□ -1.87
Tnfsf11O35235 Gm23875-201ENSMUST00000083711 318 ntBASIC3.37□□□□□ -1.87
Tnfsf11O35235 Gm6361-201ENSMUST00000091031 435 ntBASIC3.37□□□□□ -1.87
Tnfsf11O35235 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC3.37□□□□□ -1.87
Tnfsf11O35235 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC3.37□□□□□ -1.87
Tnfsf11O35235 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Tnfsf11O35235 AC190403.1-201ENSMUST00000224515 1325 ntBASIC3.37□□□□□ -1.87
Tnfsf11O35235 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Tnfsf11O35235 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Tnfsf11O35235 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Tnfsf11O35235 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
Tnfsf11O35235 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC3.37□□□□□ -1.87
Tnfsf11O35235 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC3.37□□□□□ -1.87
Tnfsf11O35235 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Tnfsf11O35235 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
Tnfsf11O35235 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Tnfsf11O35235 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Tnfsf11O35235 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Tnfsf11O35235 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Tnfsf11O35235 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Tnfsf11O35235 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Tnfsf11O35235 Gm43844-201ENSMUST00000202926 5605 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC3.36□□□□□ -1.87
Tnfsf11O35235 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Tnfsf11O35235 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Tnfsf11O35235 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC3.36□□□□□ -1.87
Tnfsf11O35235 Gm11346-201ENSMUST00000118346 704 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms