Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
NpcdF8VQB8 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NpcdF8VQB8 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NpcdF8VQB8 Gm37174-201ENSMUST00000194699 3058 ntBASIC6.58□□□□□ -1.36
NpcdF8VQB8 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC6.58□□□□□ -1.36
NpcdF8VQB8 AC153494.1-201ENSMUST00000218664 3041 ntBASIC6.58□□□□□ -1.36
NpcdF8VQB8 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
NpcdF8VQB8 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
NpcdF8VQB8 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NpcdF8VQB8 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NpcdF8VQB8 Gm42715-201ENSMUST00000189629 12746 ntAPPRIS P5 TSL 5 BASIC6.58□□□□□ -1.36
NpcdF8VQB8 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC6.58□□□□□ -1.36
NpcdF8VQB8 Gm22195-201ENSMUST00000116861 108 ntBASIC6.58□□□□□ -1.36
NpcdF8VQB8 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC6.58□□□□□ -1.36
NpcdF8VQB8 Gm15113-201ENSMUST00000119280 836 ntBASIC6.58□□□□□ -1.36
NpcdF8VQB8 Gm2318-201ENSMUST00000119623 639 ntBASIC6.58□□□□□ -1.36
NpcdF8VQB8 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC6.58□□□□□ -1.36
NpcdF8VQB8 Gm14530-201ENSMUST00000122391 333 ntBASIC6.58□□□□□ -1.36
NpcdF8VQB8 Mup-ps2-201ENSMUST00000142602 533 ntBASIC6.58□□□□□ -1.36
NpcdF8VQB8 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
NpcdF8VQB8 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC6.58□□□□□ -1.36
NpcdF8VQB8 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC6.58□□□□□ -1.36
NpcdF8VQB8 Gm22166-201ENSMUST00000178419 121 ntBASIC6.58□□□□□ -1.36
NpcdF8VQB8 Gm7398-201ENSMUST00000178589 639 ntBASIC6.58□□□□□ -1.36
NpcdF8VQB8 Gm23288-201ENSMUST00000179213 121 ntBASIC6.58□□□□□ -1.36
NpcdF8VQB8 Gm7375-201ENSMUST00000179232 639 ntBASIC6.58□□□□□ -1.36
NpcdF8VQB8 Gm5527-201ENSMUST00000179821 642 ntBASIC6.58□□□□□ -1.36
NpcdF8VQB8 Gm3681-201ENSMUST00000179940 639 ntBASIC6.58□□□□□ -1.36
NpcdF8VQB8 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NpcdF8VQB8 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NpcdF8VQB8 Gm19089-201ENSMUST00000197207 613 ntBASIC6.58□□□□□ -1.36
NpcdF8VQB8 Gm29736-201ENSMUST00000198189 385 ntBASIC6.58□□□□□ -1.36
NpcdF8VQB8 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC6.58□□□□□ -1.36
NpcdF8VQB8 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC6.58□□□□□ -1.36
NpcdF8VQB8 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
NpcdF8VQB8 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC6.58□□□□□ -1.36
NpcdF8VQB8 Gm46994-201ENSMUST00000221523 219 ntBASIC6.58□□□□□ -1.36
NpcdF8VQB8 AC154840.1-201ENSMUST00000225216 408 ntBASIC6.58□□□□□ -1.36
NpcdF8VQB8 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
NpcdF8VQB8 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NpcdF8VQB8 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
NpcdF8VQB8 Gm23378-201ENSMUST00000082942 107 ntBASIC6.58□□□□□ -1.36
NpcdF8VQB8 n-R5s79-201ENSMUST00000083071 120 ntBASIC6.58□□□□□ -1.36
NpcdF8VQB8 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NpcdF8VQB8 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NpcdF8VQB8 Gm37880-201ENSMUST00000192216 3257 ntBASIC6.58□□□□□ -1.36
NpcdF8VQB8 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC6.58□□□□□ -1.36
NpcdF8VQB8 AC131586.2-202ENSMUST00000227016 2705 ntBASIC6.58□□□□□ -1.36
NpcdF8VQB8 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC6.58□□□□□ -1.36
NpcdF8VQB8 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NpcdF8VQB8 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NpcdF8VQB8 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
NpcdF8VQB8 Gm43282-201ENSMUST00000201848 2157 ntBASIC6.58□□□□□ -1.36
NpcdF8VQB8 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NpcdF8VQB8 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
NpcdF8VQB8 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
NpcdF8VQB8 Gm37589-201ENSMUST00000193609 3994 ntBASIC6.58□□□□□ -1.36
NpcdF8VQB8 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NpcdF8VQB8 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
NpcdF8VQB8 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NpcdF8VQB8 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
NpcdF8VQB8 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
NpcdF8VQB8 Gm44668-201ENSMUST00000207911 3265 ntBASIC6.57□□□□□ -1.36
NpcdF8VQB8 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
NpcdF8VQB8 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC6.57□□□□□ -1.36
NpcdF8VQB8 Gm43201-201ENSMUST00000195925 3416 ntBASIC6.57□□□□□ -1.36
NpcdF8VQB8 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
NpcdF8VQB8 Gm14881-201ENSMUST00000120366 372 ntBASIC6.57□□□□□ -1.36
NpcdF8VQB8 Gm16100-201ENSMUST00000120489 231 ntBASIC6.57□□□□□ -1.36
NpcdF8VQB8 Gm15840-201ENSMUST00000122099 943 ntBASIC6.57□□□□□ -1.36
NpcdF8VQB8 Gm23069-201ENSMUST00000158240 311 ntBASIC6.57□□□□□ -1.36
NpcdF8VQB8 Gm2343-201ENSMUST00000161177 1042 ntBASIC6.57□□□□□ -1.36
NpcdF8VQB8 Gm22411-201ENSMUST00000175462 126 ntBASIC6.57□□□□□ -1.36
NpcdF8VQB8 Gm22002-201ENSMUST00000175622 125 ntBASIC6.57□□□□□ -1.36
NpcdF8VQB8 Gm25873-201ENSMUST00000180317 107 ntBASIC6.57□□□□□ -1.36
NpcdF8VQB8 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC6.57□□□□□ -1.36
NpcdF8VQB8 Gm27957-201ENSMUST00000184054 127 ntBASIC6.57□□□□□ -1.36
NpcdF8VQB8 Mir6238-201ENSMUST00000184140 129 ntBASIC6.57□□□□□ -1.36
NpcdF8VQB8 Mir6410-201ENSMUST00000184204 104 ntBASIC6.57□□□□□ -1.36
NpcdF8VQB8 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC6.57□□□□□ -1.36
NpcdF8VQB8 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC6.57□□□□□ -1.36
NpcdF8VQB8 Gm44307-201ENSMUST00000204466 764 ntBASIC6.57□□□□□ -1.36
NpcdF8VQB8 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC6.57□□□□□ -1.36
NpcdF8VQB8 AC131677.1-201ENSMUST00000218721 535 ntBASIC6.57□□□□□ -1.36
NpcdF8VQB8 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC6.57□□□□□ -1.36
NpcdF8VQB8 CT030195.1-201ENSMUST00000223887 378 ntBASIC6.57□□□□□ -1.36
NpcdF8VQB8 CT010486.1-201ENSMUST00000224609 422 ntBASIC6.57□□□□□ -1.36
NpcdF8VQB8 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NpcdF8VQB8 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
NpcdF8VQB8 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NpcdF8VQB8 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
NpcdF8VQB8 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
NpcdF8VQB8 Rsph4a-201ENSMUST00000169670 3650 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
NpcdF8VQB8 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.57□□□□□ -1.36
NpcdF8VQB8 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC6.57□□□□□ -1.36
NpcdF8VQB8 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
NpcdF8VQB8 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
NpcdF8VQB8 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC6.57□□□□□ -1.36
NpcdF8VQB8 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
NpcdF8VQB8 Gm37789-201ENSMUST00000192862 2889 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms