Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.28□□□□□ -1.56
Clip3B9EHT4 AC116589.3-202ENSMUST00000221770 649 ntBASIC5.28□□□□□ -1.56
Clip3B9EHT4 AC116589.6-201ENSMUST00000222252 649 ntBASIC5.28□□□□□ -1.56
Clip3B9EHT4 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Clip3B9EHT4 AC122858.3-201ENSMUST00000226341 740 ntBASIC5.28□□□□□ -1.56
Clip3B9EHT4 AC156016.5-201ENSMUST00000228742 355 ntBASIC5.28□□□□□ -1.56
Clip3B9EHT4 Gm10064-201ENSMUST00000071235 399 ntBASIC5.28□□□□□ -1.56
Clip3B9EHT4 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Clip3B9EHT4 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC5.28□□□□□ -1.56
Clip3B9EHT4 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Clip3B9EHT4 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC5.28□□□□□ -1.56
Clip3B9EHT4 AC134917.1-201ENSMUST00000220517 1449 ntBASIC5.28□□□□□ -1.56
Clip3B9EHT4 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Clip3B9EHT4 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Clip3B9EHT4 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Clip3B9EHT4 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Clip3B9EHT4 Gm38065-201ENSMUST00000193147 3492 ntBASIC5.28□□□□□ -1.56
Clip3B9EHT4 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Clip3B9EHT4 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Clip3B9EHT4 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Clip3B9EHT4 Gm15624-203ENSMUST00000204811 3402 ntBASIC5.27□□□□□ -1.57
Clip3B9EHT4 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Clip3B9EHT4 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Clip3B9EHT4 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Clip3B9EHT4 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Clip3B9EHT4 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.27□□□□□ -1.57
Clip3B9EHT4 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Clip3B9EHT4 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Clip3B9EHT4 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Clip3B9EHT4 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Clip3B9EHT4 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC5.27□□□□□ -1.57
Clip3B9EHT4 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Clip3B9EHT4 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Clip3B9EHT4 Gm22072-201ENSMUST00000116850 121 ntBASIC5.27□□□□□ -1.57
Clip3B9EHT4 Gm15312-201ENSMUST00000118827 271 ntBASIC5.27□□□□□ -1.57
Clip3B9EHT4 Gm14901-201ENSMUST00000119001 283 ntBASIC5.27□□□□□ -1.57
Clip3B9EHT4 Gm15309-201ENSMUST00000121644 240 ntBASIC5.27□□□□□ -1.57
Clip3B9EHT4 Gm14903-201ENSMUST00000122435 537 ntBASIC5.27□□□□□ -1.57
Clip3B9EHT4 Gm14651-201ENSMUST00000147192 442 ntBASIC5.27□□□□□ -1.57
Clip3B9EHT4 Mir1970-201ENSMUST00000157839 104 ntBASIC5.27□□□□□ -1.57
Clip3B9EHT4 Gm26172-201ENSMUST00000158421 134 ntBASIC5.27□□□□□ -1.57
Clip3B9EHT4 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC5.27□□□□□ -1.57
Clip3B9EHT4 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.27□□□□□ -1.57
Clip3B9EHT4 Gm3084-201ENSMUST00000169967 598 ntBASIC5.27□□□□□ -1.57
Clip3B9EHT4 Mir3080-201ENSMUST00000175010 79 ntBASIC5.27□□□□□ -1.57
Clip3B9EHT4 Gm22411-201ENSMUST00000175462 126 ntBASIC5.27□□□□□ -1.57
Clip3B9EHT4 Gm22002-201ENSMUST00000175622 125 ntBASIC5.27□□□□□ -1.57
Clip3B9EHT4 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC5.27□□□□□ -1.57
Clip3B9EHT4 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Clip3B9EHT4 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Clip3B9EHT4 Gm28997-201ENSMUST00000188759 429 ntBASIC5.27□□□□□ -1.57
Clip3B9EHT4 Gm28389-201ENSMUST00000190090 697 ntBASIC5.27□□□□□ -1.57
Clip3B9EHT4 Gm28655-201ENSMUST00000191538 692 ntBASIC5.27□□□□□ -1.57
Clip3B9EHT4 Gm17953-201ENSMUST00000192061 667 ntBASIC5.27□□□□□ -1.57
Clip3B9EHT4 Gm2147-201ENSMUST00000193588 639 ntBASIC5.27□□□□□ -1.57
Clip3B9EHT4 Gm42579-201ENSMUST00000200512 734 ntBASIC5.27□□□□□ -1.57
Clip3B9EHT4 Gm8675-201ENSMUST00000201408 1856 ntBASIC5.27□□□□□ -1.57
Clip3B9EHT4 Gm44108-201ENSMUST00000203525 422 ntBASIC5.27□□□□□ -1.57
Clip3B9EHT4 Gm44580-201ENSMUST00000206333 877 ntBASIC5.27□□□□□ -1.57
Clip3B9EHT4 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC5.27□□□□□ -1.57
Clip3B9EHT4 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC5.27□□□□□ -1.57
Clip3B9EHT4 Gm18587-201ENSMUST00000213736 841 ntBASIC5.27□□□□□ -1.57
Clip3B9EHT4 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC5.27□□□□□ -1.57
Clip3B9EHT4 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Clip3B9EHT4 CR974485.1-201ENSMUST00000222408 402 ntBASIC5.27□□□□□ -1.57
Clip3B9EHT4 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC5.27□□□□□ -1.57
Clip3B9EHT4 AC122858.1-202ENSMUST00000228290 986 ntBASIC5.27□□□□□ -1.57
Clip3B9EHT4 AC112142.1-203ENSMUST00000228670 2472 ntBASIC5.27□□□□□ -1.57
Clip3B9EHT4 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Clip3B9EHT4 Gm23677-201ENSMUST00000083156 104 ntBASIC5.27□□□□□ -1.57
Clip3B9EHT4 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
Clip3B9EHT4 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Clip3B9EHT4 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Clip3B9EHT4 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Clip3B9EHT4 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Clip3B9EHT4 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Clip3B9EHT4 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.27□□□□□ -1.57
Clip3B9EHT4 Gm37553-201ENSMUST00000194135 1602 ntBASIC5.26□□□□□ -1.57
Clip3B9EHT4 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Clip3B9EHT4 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Clip3B9EHT4 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Clip3B9EHT4 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Clip3B9EHT4 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Clip3B9EHT4 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC5.26□□□□□ -1.57
Clip3B9EHT4 Gm37049-201ENSMUST00000194356 1983 ntBASIC5.26□□□□□ -1.57
Clip3B9EHT4 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.26□□□□□ -1.57
Clip3B9EHT4 Mir680-3-201ENSMUST00000102298 87 ntBASIC5.26□□□□□ -1.57
Clip3B9EHT4 Gm13681-201ENSMUST00000117925 210 ntBASIC5.26□□□□□ -1.57
Clip3B9EHT4 Gm15400-201ENSMUST00000118944 601 ntBASIC5.26□□□□□ -1.57
Clip3B9EHT4 Gm13887-201ENSMUST00000119009 344 ntBASIC5.26□□□□□ -1.57
Clip3B9EHT4 Gm7079-201ENSMUST00000119726 171 ntBASIC5.26□□□□□ -1.57
Clip3B9EHT4 Gm5942-201ENSMUST00000120046 439 ntBASIC5.26□□□□□ -1.57
Clip3B9EHT4 Gm13751-201ENSMUST00000120280 752 ntBASIC5.26□□□□□ -1.57
Clip3B9EHT4 Gm4912-201ENSMUST00000122212 1044 ntBASIC5.26□□□□□ -1.57
Clip3B9EHT4 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.26□□□□□ -1.57
Clip3B9EHT4 Gtsf1-205ENSMUST00000141364 700 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Clip3B9EHT4 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC5.26□□□□□ -1.57
Clip3B9EHT4 Gm22529-201ENSMUST00000158817 123 ntBASIC5.26□□□□□ -1.57
Clip3B9EHT4 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Clip3B9EHT4 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms