Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Col4a6B1AVK5 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Col4a6B1AVK5 Gm14973-201ENSMUST00000117248 255 ntBASIC4.18□□□□□ -1.74
Col4a6B1AVK5 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC4.18□□□□□ -1.74
Col4a6B1AVK5 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC4.18□□□□□ -1.74
Col4a6B1AVK5 Gm25105-201ENSMUST00000122477 130 ntBASIC4.18□□□□□ -1.74
Col4a6B1AVK5 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC4.18□□□□□ -1.74
Col4a6B1AVK5 Gm24014-201ENSMUST00000157728 157 ntBASIC4.18□□□□□ -1.74
Col4a6B1AVK5 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Col4a6B1AVK5 Gm26746-201ENSMUST00000181722 487 ntBASIC4.18□□□□□ -1.74
Col4a6B1AVK5 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.18□□□□□ -1.74
Col4a6B1AVK5 Mir7081-201ENSMUST00000184490 75 ntBASIC4.18□□□□□ -1.74
Col4a6B1AVK5 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC4.18□□□□□ -1.74
Col4a6B1AVK5 Gm37239-201ENSMUST00000193510 141 ntBASIC4.18□□□□□ -1.74
Col4a6B1AVK5 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.18□□□□□ -1.74
Col4a6B1AVK5 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC4.18□□□□□ -1.74
Col4a6B1AVK5 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC4.18□□□□□ -1.74
Col4a6B1AVK5 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC4.18□□□□□ -1.74
Col4a6B1AVK5 Gm3565-201ENSMUST00000222670 609 ntBASIC4.18□□□□□ -1.74
Col4a6B1AVK5 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Col4a6B1AVK5 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Col4a6B1AVK5 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Col4a6B1AVK5 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Col4a6B1AVK5 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
Col4a6B1AVK5 Gm42478-201ENSMUST00000199252 1467 ntBASIC4.18□□□□□ -1.74
Col4a6B1AVK5 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.18□□□□□ -1.74
Col4a6B1AVK5 Gm2987-201ENSMUST00000187673 1693 ntBASIC4.18□□□□□ -1.74
Col4a6B1AVK5 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Col4a6B1AVK5 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.17□□□□□ -1.74
Col4a6B1AVK5 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Col4a6B1AVK5 Gm23602-201ENSMUST00000157258 132 ntBASIC4.17□□□□□ -1.74
Col4a6B1AVK5 Gm23666-201ENSMUST00000158053 116 ntBASIC4.17□□□□□ -1.74
Col4a6B1AVK5 Gm17060-201ENSMUST00000172394 824 ntBASIC4.17□□□□□ -1.74
Col4a6B1AVK5 Gm5066-201ENSMUST00000188479 822 ntBASIC4.17□□□□□ -1.74
Col4a6B1AVK5 Gm37741-201ENSMUST00000191768 1256 ntBASIC4.17□□□□□ -1.74
Col4a6B1AVK5 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC4.17□□□□□ -1.74
Col4a6B1AVK5 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Col4a6B1AVK5 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col4a6B1AVK5 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col4a6B1AVK5 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Col4a6B1AVK5 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Col4a6B1AVK5 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Col4a6B1AVK5 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Col4a6B1AVK5 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.17□□□□□ -1.74
Col4a6B1AVK5 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.17□□□□□ -1.74
Col4a6B1AVK5 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Col4a6B1AVK5 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Col4a6B1AVK5 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Col4a6B1AVK5 Gm45884-201ENSMUST00000209540 3416 ntBASIC4.17□□□□□ -1.74
Col4a6B1AVK5 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Col4a6B1AVK5 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col4a6B1AVK5 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Col4a6B1AVK5 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Col4a6B1AVK5 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Col4a6B1AVK5 Gm13321-201ENSMUST00000117101 400 ntBASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Gm6265-201ENSMUST00000149263 231 ntBASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Gm26276-201ENSMUST00000157099 109 ntBASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Gm17953-201ENSMUST00000192061 667 ntBASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Gm44600-201ENSMUST00000208540 111 ntBASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Gm19219-201ENSMUST00000215863 724 ntBASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Mir215-201ENSMUST00000083628 112 ntBASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Gm18954-201ENSMUST00000222200 1792 ntBASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Gm26273-201ENSMUST00000104180 131 ntBASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Gm25272-201ENSMUST00000104293 128 ntBASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Gm28010-201ENSMUST00000179485 126 ntBASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Gm28190-201ENSMUST00000189766 722 ntBASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Gm37343-201ENSMUST00000192542 111 ntBASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Gm9722-201ENSMUST00000194568 802 ntBASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Gm17954-201ENSMUST00000195893 607 ntBASIC4.16□□□□□ -1.74
Col4a6B1AVK5 AC125379.1-201ENSMUST00000221928 111 ntBASIC4.16□□□□□ -1.74
Col4a6B1AVK5 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Gm23302-201ENSMUST00000082710 100 ntBASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col4a6B1AVK5 Gm37236-201ENSMUST00000193670 3249 ntBASIC4.15□□□□□ -1.74
Col4a6B1AVK5 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Col4a6B1AVK5 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Col4a6B1AVK5 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
Col4a6B1AVK5 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
Col4a6B1AVK5 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Col4a6B1AVK5 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms