Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm11432-201ENSMUST00000117334 231 ntBASIC3.33□□□□□ -1.88
Col6a4A2AX52 Gm15026-201ENSMUST00000119219 458 ntBASIC3.33□□□□□ -1.88
Col6a4A2AX52 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC3.33□□□□□ -1.88
Col6a4A2AX52 Gm25369-201ENSMUST00000158848 132 ntBASIC3.33□□□□□ -1.88
Col6a4A2AX52 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Col6a4A2AX52 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.33□□□□□ -1.88
Col6a4A2AX52 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC3.33□□□□□ -1.88
Col6a4A2AX52 Gm44099-201ENSMUST00000203299 112 ntBASIC3.33□□□□□ -1.88
Col6a4A2AX52 Gm8774-201ENSMUST00000203621 692 ntBASIC3.33□□□□□ -1.88
Col6a4A2AX52 Gm8132-201ENSMUST00000204938 640 ntBASIC3.33□□□□□ -1.88
Col6a4A2AX52 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.33□□□□□ -1.88
Col6a4A2AX52 Gm6929-201ENSMUST00000210930 468 ntBASIC3.33□□□□□ -1.88
Col6a4A2AX52 AC153794.2-201ENSMUST00000222650 550 ntBASIC3.33□□□□□ -1.88
Col6a4A2AX52 Gm3565-201ENSMUST00000222670 609 ntBASIC3.33□□□□□ -1.88
Col6a4A2AX52 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Col6a4A2AX52 Gm5185-201ENSMUST00000080271 619 ntBASIC3.33□□□□□ -1.88
Col6a4A2AX52 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Col6a4A2AX52 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Col6a4A2AX52 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.33□□□□□ -1.88
Col6a4A2AX52 Gm42600-201ENSMUST00000202081 3588 ntBASIC3.33□□□□□ -1.88
Col6a4A2AX52 Gm18066-201ENSMUST00000210904 1774 ntBASIC3.33□□□□□ -1.88
Col6a4A2AX52 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col6a4A2AX52 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col6a4A2AX52 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Col6a4A2AX52 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col6a4A2AX52 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Col6a4A2AX52 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Col6a4A2AX52 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col6a4A2AX52 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC3.33□□□□□ -1.88
Col6a4A2AX52 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC3.33□□□□□ -1.88
Col6a4A2AX52 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Col6a4A2AX52 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Col6a4A2AX52 Mir7081-201ENSMUST00000184490 75 ntBASIC3.33□□□□□ -1.88
Col6a4A2AX52 Gm28660-201ENSMUST00000186496 253 ntBASIC3.33□□□□□ -1.88
Col6a4A2AX52 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Col6a4A2AX52 Gm7443-201ENSMUST00000206355 378 ntBASIC3.33□□□□□ -1.88
Col6a4A2AX52 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC3.33□□□□□ -1.88
Col6a4A2AX52 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC3.33□□□□□ -1.88
Col6a4A2AX52 Gm19095-201ENSMUST00000220533 730 ntBASIC3.33□□□□□ -1.88
Col6a4A2AX52 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col6a4A2AX52 Gm43327-201ENSMUST00000199285 4055 ntBASIC3.33□□□□□ -1.88
Col6a4A2AX52 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col6a4A2AX52 Gm45223-201ENSMUST00000207037 5138 ntBASIC3.33□□□□□ -1.88
Col6a4A2AX52 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Col6a4A2AX52 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Col6a4A2AX52 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Col6a4A2AX52 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Col6a4A2AX52 Gm13076-201ENSMUST00000118041 204 ntBASIC3.32□□□□□ -1.88
Col6a4A2AX52 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC3.32□□□□□ -1.88
Col6a4A2AX52 Gm13852-201ENSMUST00000122350 242 ntBASIC3.32□□□□□ -1.88
Col6a4A2AX52 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Col6a4A2AX52 Gm22889-201ENSMUST00000158639 58 ntBASIC3.32□□□□□ -1.88
Col6a4A2AX52 Gm19503-201ENSMUST00000187109 241 ntBASIC3.32□□□□□ -1.88
Col6a4A2AX52 Gm37355-201ENSMUST00000193345 606 ntBASIC3.32□□□□□ -1.88
Col6a4A2AX52 Gm43005-201ENSMUST00000199015 648 ntBASIC3.32□□□□□ -1.88
Col6a4A2AX52 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.32□□□□□ -1.88
Col6a4A2AX52 Gm23927-201ENSMUST00000082466 215 ntBASIC3.32□□□□□ -1.88
Col6a4A2AX52 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Col6a4A2AX52 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.32□□□□□ -1.88
Col6a4A2AX52 AC154323.3-201ENSMUST00000226927 1660 ntBASIC3.32□□□□□ -1.88
Col6a4A2AX52 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC3.32□□□□□ -1.88
Col6a4A2AX52 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col6a4A2AX52 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Col6a4A2AX52 AC154627.2-201ENSMUST00000227028 4669 ntBASIC3.32□□□□□ -1.88
Col6a4A2AX52 Gm43313-201ENSMUST00000201398 2235 ntBASIC3.32□□□□□ -1.88
Col6a4A2AX52 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col6a4A2AX52 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
Col6a4A2AX52 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC3.32□□□□□ -1.88
Col6a4A2AX52 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col6a4A2AX52 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Col6a4A2AX52 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Col6a4A2AX52 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Col6a4A2AX52 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Col6a4A2AX52 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col6a4A2AX52 Gm13478-201ENSMUST00000118312 413 ntBASIC3.32□□□□□ -1.88
Col6a4A2AX52 Gm11718-201ENSMUST00000119942 537 ntBASIC3.32□□□□□ -1.88
Col6a4A2AX52 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.32□□□□□ -1.88
Col6a4A2AX52 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.32□□□□□ -1.88
Col6a4A2AX52 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC3.32□□□□□ -1.88
Col6a4A2AX52 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.32□□□□□ -1.88
Col6a4A2AX52 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Col6a4A2AX52 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Col6a4A2AX52 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC3.32□□□□□ -1.88
Col6a4A2AX52 Gm3829-201ENSMUST00000222362 619 ntBASIC3.32□□□□□ -1.88
Col6a4A2AX52 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Col6a4A2AX52 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col6a4A2AX52 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col6a4A2AX52 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
Col6a4A2AX52 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
Col6a4A2AX52 Gm4991-201ENSMUST00000118899 1552 ntBASIC3.32□□□□□ -1.88
Col6a4A2AX52 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Col6a4A2AX52 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Col6a4A2AX52 Gm43197-201ENSMUST00000201493 2583 ntBASIC3.31□□□□□ -1.88
Col6a4A2AX52 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Col6a4A2AX52 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col6a4A2AX52 Gm12149-201ENSMUST00000117511 654 ntBASIC3.31□□□□□ -1.88
Col6a4A2AX52 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC3.31□□□□□ -1.88
Col6a4A2AX52 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC3.31□□□□□ -1.88
Col6a4A2AX52 AC133189.1-201ENSMUST00000198820 140 ntBASIC3.31□□□□□ -1.88
Col6a4A2AX52 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms