Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CtcflA2APF3 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CtcflA2APF3 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.9□□□□□ -1.78
CtcflA2APF3 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CtcflA2APF3 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
CtcflA2APF3 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
CtcflA2APF3 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.9□□□□□ -1.79
CtcflA2APF3 Gm22020-201ENSMUST00000104358 136 ntBASIC3.9□□□□□ -1.79
CtcflA2APF3 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CtcflA2APF3 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CtcflA2APF3 Gm9427-201ENSMUST00000116187 651 ntBASIC3.9□□□□□ -1.79
CtcflA2APF3 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC3.9□□□□□ -1.79
CtcflA2APF3 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC3.9□□□□□ -1.79
CtcflA2APF3 Gm12757-201ENSMUST00000119465 800 ntBASIC3.9□□□□□ -1.79
CtcflA2APF3 Gm14119-201ENSMUST00000119511 235 ntBASIC3.9□□□□□ -1.79
CtcflA2APF3 Gm13815-201ENSMUST00000119963 412 ntBASIC3.9□□□□□ -1.79
CtcflA2APF3 Mup-ps18-201ENSMUST00000120145 531 ntBASIC3.9□□□□□ -1.79
CtcflA2APF3 Gm14977-201ENSMUST00000121626 812 ntBASIC3.9□□□□□ -1.79
CtcflA2APF3 Gm14559-201ENSMUST00000121745 496 ntBASIC3.9□□□□□ -1.79
CtcflA2APF3 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC3.9□□□□□ -1.79
CtcflA2APF3 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC3.9□□□□□ -1.79
CtcflA2APF3 Gm3757-201ENSMUST00000125878 675 ntBASIC3.9□□□□□ -1.79
CtcflA2APF3 Gm5263-201ENSMUST00000163646 601 ntBASIC3.9□□□□□ -1.79
CtcflA2APF3 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
CtcflA2APF3 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC3.9□□□□□ -1.79
CtcflA2APF3 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CtcflA2APF3 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
CtcflA2APF3 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
CtcflA2APF3 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CtcflA2APF3 Gm28594-201ENSMUST00000187022 661 ntBASIC3.9□□□□□ -1.79
CtcflA2APF3 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC3.9□□□□□ -1.79
CtcflA2APF3 Gm29036-201ENSMUST00000189967 877 ntBASIC3.9□□□□□ -1.79
CtcflA2APF3 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC3.9□□□□□ -1.79
CtcflA2APF3 Gm36954-201ENSMUST00000195362 363 ntBASIC3.9□□□□□ -1.79
CtcflA2APF3 Gm43524-201ENSMUST00000197278 298 ntBASIC3.9□□□□□ -1.79
CtcflA2APF3 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC3.9□□□□□ -1.79
CtcflA2APF3 Gm36371-201ENSMUST00000209043 1103 ntBASIC3.9□□□□□ -1.79
CtcflA2APF3 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC3.9□□□□□ -1.79
CtcflA2APF3 Gm18442-201ENSMUST00000220925 639 ntBASIC3.9□□□□□ -1.79
CtcflA2APF3 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CtcflA2APF3 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC3.9□□□□□ -1.79
CtcflA2APF3 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CtcflA2APF3 Mir134-201ENSMUST00000083492 71 ntBASIC3.9□□□□□ -1.79
CtcflA2APF3 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CtcflA2APF3 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CtcflA2APF3 Gm42843-201ENSMUST00000196328 3616 ntBASIC3.9□□□□□ -1.79
CtcflA2APF3 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CtcflA2APF3 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.89□□□□□ -1.79
CtcflA2APF3 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CtcflA2APF3 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CtcflA2APF3 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CtcflA2APF3 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CtcflA2APF3 Gm24117-201ENSMUST00000103973 133 ntBASIC3.89□□□□□ -1.79
CtcflA2APF3 Gm22899-201ENSMUST00000104540 131 ntBASIC3.89□□□□□ -1.79
CtcflA2APF3 Gm15148-201ENSMUST00000117602 156 ntBASIC3.89□□□□□ -1.79
CtcflA2APF3 Gm12467-201ENSMUST00000117625 745 ntBASIC3.89□□□□□ -1.79
CtcflA2APF3 Gm15058-201ENSMUST00000117689 458 ntBASIC3.89□□□□□ -1.79
CtcflA2APF3 Gm12087-201ENSMUST00000121878 258 ntBASIC3.89□□□□□ -1.79
CtcflA2APF3 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC3.89□□□□□ -1.79
CtcflA2APF3 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC3.89□□□□□ -1.79
CtcflA2APF3 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC3.89□□□□□ -1.79
CtcflA2APF3 Gm3362-201ENSMUST00000148102 466 ntBASIC3.89□□□□□ -1.79
CtcflA2APF3 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CtcflA2APF3 Gm24188-201ENSMUST00000157980 108 ntBASIC3.89□□□□□ -1.79
CtcflA2APF3 Gm8224-201ENSMUST00000166178 497 ntBASIC3.89□□□□□ -1.79
CtcflA2APF3 Gm26828-201ENSMUST00000180640 172 ntBASIC3.89□□□□□ -1.79
CtcflA2APF3 Gm26895-201ENSMUST00000181295 619 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CtcflA2APF3 Mir7056-201ENSMUST00000183776 59 ntBASIC3.89□□□□□ -1.79
CtcflA2APF3 Gm28503-201ENSMUST00000185966 147 ntBASIC3.89□□□□□ -1.79
CtcflA2APF3 Gm28654-201ENSMUST00000189801 379 ntBASIC3.89□□□□□ -1.79
CtcflA2APF3 Gm29332-201ENSMUST00000190829 227 ntBASIC3.89□□□□□ -1.79
CtcflA2APF3 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC3.89□□□□□ -1.79
CtcflA2APF3 Gm18150-201ENSMUST00000195341 645 ntBASIC3.89□□□□□ -1.79
CtcflA2APF3 Trav3-2-201ENSMUST00000198999 305 ntBASIC3.89□□□□□ -1.79
CtcflA2APF3 Gm43440-201ENSMUST00000201957 729 ntBASIC3.89□□□□□ -1.79
CtcflA2APF3 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC3.89□□□□□ -1.79
CtcflA2APF3 AC166902.1-201ENSMUST00000216653 517 ntBASIC3.89□□□□□ -1.79
CtcflA2APF3 Gm8264-201ENSMUST00000217801 465 ntBASIC3.89□□□□□ -1.79
CtcflA2APF3 Gm8158-201ENSMUST00000219220 465 ntBASIC3.89□□□□□ -1.79
CtcflA2APF3 Gm8112-201ENSMUST00000219637 465 ntBASIC3.89□□□□□ -1.79
CtcflA2APF3 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC3.89□□□□□ -1.79
CtcflA2APF3 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC3.89□□□□□ -1.79
CtcflA2APF3 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CtcflA2APF3 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CtcflA2APF3 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CtcflA2APF3 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CtcflA2APF3 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CtcflA2APF3 Gm21033-201ENSMUST00000208590 2608 ntBASIC3.89□□□□□ -1.79
CtcflA2APF3 Ttc33-202ENSMUST00000081640 1583 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CtcflA2APF3 Gm7451-201ENSMUST00000208382 1392 ntBASIC3.89□□□□□ -1.79
CtcflA2APF3 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CtcflA2APF3 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
CtcflA2APF3 Gm38106-201ENSMUST00000194107 2534 ntBASIC3.88□□□□□ -1.79
CtcflA2APF3 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC3.88□□□□□ -1.79
CtcflA2APF3 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CtcflA2APF3 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CtcflA2APF3 Gm44286-201ENSMUST00000204098 1487 ntBASIC3.88□□□□□ -1.79
CtcflA2APF3 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CtcflA2APF3 Gm11366-201ENSMUST00000119279 429 ntBASIC3.88□□□□□ -1.79
CtcflA2APF3 Gm13557-201ENSMUST00000120771 382 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 121.2 ms