Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Mir6963-201ENSMUST00000183535 71 ntBASIC4.15□□□□□ -1.75
Trim3Q9R1R2 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Trim3Q9R1R2 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Gm28439-201ENSMUST00000187714 876 ntBASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Gm17956-201ENSMUST00000199931 838 ntBASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Gm43028-201ENSMUST00000202561 481 ntBASIC4.15□□□□□ -1.75
Trim3Q9R1R2 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Gm44521-201ENSMUST00000206469 217 ntBASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Gm45367-201ENSMUST00000210171 347 ntBASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Gm4928-201ENSMUST00000219622 850 ntBASIC4.15□□□□□ -1.75
Trim3Q9R1R2 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Gm6988-201ENSMUST00000222676 375 ntBASIC4.15□□□□□ -1.75
Trim3Q9R1R2 AC154626.1-201ENSMUST00000226070 311 ntBASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Gm26449-201ENSMUST00000082452 104 ntBASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Trim3Q9R1R2 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Trim3Q9R1R2 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Gm23948-201ENSMUST00000104030 132 ntBASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Trim3Q9R1R2 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Gm13733-201ENSMUST00000117290 535 ntBASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Gm12571-201ENSMUST00000118132 243 ntBASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Gm8475-201ENSMUST00000118211 526 ntBASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Gm8051-201ENSMUST00000120464 466 ntBASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Gm24444-201ENSMUST00000157244 308 ntBASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Gm23501-201ENSMUST00000157744 256 ntBASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Gm22243-201ENSMUST00000178754 120 ntBASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Gm21850-201ENSMUST00000179792 359 ntBASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Gm27875-201ENSMUST00000184425 123 ntBASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Gm27564-201ENSMUST00000185196 96 ntBASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Gm43037-201ENSMUST00000196808 250 ntBASIC4.14□□□□□ -1.75
Trim3Q9R1R2 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC4.14□□□□□ -1.75
Trim3Q9R1R2 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Trim3Q9R1R2 AC166263.1-201ENSMUST00000218586 238 ntBASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.14□□□□□ -1.75
Trim3Q9R1R2 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Mecom-201ENSMUST00000061088 348 ntBASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Gm25739-201ENSMUST00000082886 107 ntBASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Gm24319-201ENSMUST00000083389 107 ntBASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Gm37916-201ENSMUST00000192153 2435 ntBASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.14□□□□□ -1.75
Trim3Q9R1R2 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.14□□□□□ -1.75
Trim3Q9R1R2 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Trim3Q9R1R2 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Gm37412-201ENSMUST00000194866 4321 ntBASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Gm22657-201ENSMUST00000104197 132 ntBASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Gm13386-201ENSMUST00000117677 124 ntBASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Gm14586-201ENSMUST00000119571 408 ntBASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Gm12978-201ENSMUST00000121250 522 ntBASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Trim3Q9R1R2 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Gm25839-201ENSMUST00000158921 103 ntBASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Gm15796-201ENSMUST00000162135 204 ntBASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Gm17159-201ENSMUST00000169043 482 ntBASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Gm27457-201ENSMUST00000184771 156 ntBASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Gm20954-201ENSMUST00000189078 644 ntBASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Gm28872-201ENSMUST00000191518 158 ntBASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Gm37005-201ENSMUST00000193281 1164 ntBASIC4.13□□□□□ -1.75
Trim3Q9R1R2 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms