Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Lima1Q9ERG0 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Lima1Q9ERG0 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
Lima1Q9ERG0 Gm13607-201ENSMUST00000117875 539 ntBASIC4.04□□□□□ -1.76
Lima1Q9ERG0 Gm14933-201ENSMUST00000118840 481 ntBASIC4.04□□□□□ -1.76
Lima1Q9ERG0 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Lima1Q9ERG0 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC4.04□□□□□ -1.76
Lima1Q9ERG0 Gm15534-201ENSMUST00000137642 562 ntBASIC4.04□□□□□ -1.76
Lima1Q9ERG0 Gm13348-201ENSMUST00000147324 690 ntTSL 5 BASIC4.04□□□□□ -1.76
Lima1Q9ERG0 Gm26187-201ENSMUST00000157693 101 ntBASIC4.04□□□□□ -1.76
Lima1Q9ERG0 Gm23385-201ENSMUST00000158592 295 ntBASIC4.04□□□□□ -1.76
Lima1Q9ERG0 Gm13249-201ENSMUST00000177803 345 ntBASIC4.04□□□□□ -1.76
Lima1Q9ERG0 Gm13144-201ENSMUST00000179385 345 ntBASIC4.04□□□□□ -1.76
Lima1Q9ERG0 Gm29281-201ENSMUST00000188077 381 ntBASIC4.04□□□□□ -1.76
Lima1Q9ERG0 Gm37241-201ENSMUST00000191736 523 ntBASIC4.04□□□□□ -1.76
Lima1Q9ERG0 Gm44023-201ENSMUST00000203710 469 ntBASIC4.04□□□□□ -1.76
Lima1Q9ERG0 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.04□□□□□ -1.76
Lima1Q9ERG0 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC4.04□□□□□ -1.76
Lima1Q9ERG0 Gm44946-201ENSMUST00000208425 572 ntBASIC4.04□□□□□ -1.76
Lima1Q9ERG0 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.04□□□□□ -1.76
Lima1Q9ERG0 CT009754.4-201ENSMUST00000221430 565 ntBASIC4.04□□□□□ -1.76
Lima1Q9ERG0 AC119573.1-201ENSMUST00000227960 757 ntBASIC4.04□□□□□ -1.76
Lima1Q9ERG0 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Lima1Q9ERG0 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.04□□□□□ -1.76
Lima1Q9ERG0 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Lima1Q9ERG0 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Lima1Q9ERG0 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.04□□□□□ -1.76
Lima1Q9ERG0 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Lima1Q9ERG0 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Lima1Q9ERG0 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Lima1Q9ERG0 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Lima1Q9ERG0 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Lima1Q9ERG0 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
Lima1Q9ERG0 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
Lima1Q9ERG0 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.03□□□□□ -1.76
Lima1Q9ERG0 Gm26367-201ENSMUST00000104165 132 ntBASIC4.03□□□□□ -1.76
Lima1Q9ERG0 Gm12931-201ENSMUST00000117046 324 ntBASIC4.03□□□□□ -1.76
Lima1Q9ERG0 Gm14816-201ENSMUST00000117174 294 ntBASIC4.03□□□□□ -1.76
Lima1Q9ERG0 Gm6893-201ENSMUST00000118385 522 ntBASIC4.03□□□□□ -1.76
Lima1Q9ERG0 Gm12466-201ENSMUST00000121199 620 ntBASIC4.03□□□□□ -1.76
Lima1Q9ERG0 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.03□□□□□ -1.76
Lima1Q9ERG0 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC4.03□□□□□ -1.76
Lima1Q9ERG0 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Lima1Q9ERG0 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Lima1Q9ERG0 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC4.03□□□□□ -1.76
Lima1Q9ERG0 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC4.03□□□□□ -1.76
Lima1Q9ERG0 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC4.03□□□□□ -1.76
Lima1Q9ERG0 Gm3496-201ENSMUST00000188283 745 ntBASIC4.03□□□□□ -1.76
Lima1Q9ERG0 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.03□□□□□ -1.76
Lima1Q9ERG0 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC4.03□□□□□ -1.76
Lima1Q9ERG0 Gm17766-201ENSMUST00000209223 442 ntBASIC4.03□□□□□ -1.76
Lima1Q9ERG0 Gm45710-201ENSMUST00000212847 215 ntBASIC4.03□□□□□ -1.76
Lima1Q9ERG0 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC4.03□□□□□ -1.76
Lima1Q9ERG0 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC4.03□□□□□ -1.76
Lima1Q9ERG0 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.03□□□□□ -1.76
Lima1Q9ERG0 AC154626.1-201ENSMUST00000226070 311 ntBASIC4.03□□□□□ -1.76
Lima1Q9ERG0 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Lima1Q9ERG0 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Lima1Q9ERG0 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC4.03□□□□□ -1.76
Lima1Q9ERG0 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Lima1Q9ERG0 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.03□□□□□ -1.76
Lima1Q9ERG0 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Lima1Q9ERG0 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
Lima1Q9ERG0 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Lima1Q9ERG0 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Lima1Q9ERG0 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Lima1Q9ERG0 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Lima1Q9ERG0 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.77
Lima1Q9ERG0 AC154184.1-201ENSMUST00000224375 1620 ntBASIC4.03□□□□□ -1.77
Lima1Q9ERG0 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
Lima1Q9ERG0 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Lima1Q9ERG0 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Lima1Q9ERG0 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Gm13687-201ENSMUST00000119857 282 ntBASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Gm14875-201ENSMUST00000120881 319 ntBASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Gm14908-201ENSMUST00000120930 1286 ntBASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Gm5379-201ENSMUST00000120973 826 ntBASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Gm6969-201ENSMUST00000140065 342 ntBASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Gm3030-201ENSMUST00000163410 516 ntBASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Gm3339-201ENSMUST00000163462 475 ntBASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Gm29634-201ENSMUST00000188467 696 ntBASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Gm28699-201ENSMUST00000189193 696 ntBASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Gm28920-201ENSMUST00000189957 699 ntBASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Gm36638-201ENSMUST00000193295 400 ntBASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Gm44371-201ENSMUST00000204148 467 ntBASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Gm45735-201ENSMUST00000212779 319 ntBASIC4.02□□□□□ -1.77
Lima1Q9ERG0 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC4.02□□□□□ -1.77
Lima1Q9ERG0 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC4.02□□□□□ -1.77
Lima1Q9ERG0 AC141884.1-201ENSMUST00000226327 636 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms