Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm7451-201ENSMUST00000208382 1392 ntBASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.11□□□□□ -1.75
Ccdc3Q9D6Y1 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Gm25169-201ENSMUST00000104190 129 ntBASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Gm13902-201ENSMUST00000120168 605 ntBASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Gm14725-201ENSMUST00000120324 828 ntBASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Gm11398-201ENSMUST00000120330 320 ntBASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Gm12222-201ENSMUST00000121368 260 ntBASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Gm25104-201ENSMUST00000122476 163 ntBASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Gm22859-201ENSMUST00000174978 122 ntBASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Gm29556-201ENSMUST00000187591 696 ntBASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Gm19774-201ENSMUST00000190667 114 ntBASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Gm43856-201ENSMUST00000197004 369 ntBASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Gm43276-201ENSMUST00000199712 364 ntBASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr1309-201ENSMUST00000207885 964 ntBASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 AC124356.2-201ENSMUST00000221874 336 ntBASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 AC159256.1-201ENSMUST00000224298 1039 ntBASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Gm23623-201ENSMUST00000082461 107 ntBASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Gm43374-201ENSMUST00000202498 2391 ntBASIC4.1□□□□□ -1.75
Ccdc3Q9D6Y1 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Ccdc3Q9D6Y1 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Ccdc3Q9D6Y1 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.09□□□□□ -1.75
Ccdc3Q9D6Y1 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
Ccdc3Q9D6Y1 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Ccdc3Q9D6Y1 Gm11325-201ENSMUST00000119967 469 ntBASIC4.09□□□□□ -1.75
Ccdc3Q9D6Y1 Gm1866-201ENSMUST00000120701 477 ntBASIC4.09□□□□□ -1.75
Ccdc3Q9D6Y1 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Ccdc3Q9D6Y1 Gm25713-201ENSMUST00000158625 109 ntBASIC4.09□□□□□ -1.75
Ccdc3Q9D6Y1 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC4.09□□□□□ -1.75
Ccdc3Q9D6Y1 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC4.09□□□□□ -1.75
Ccdc3Q9D6Y1 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Ccdc3Q9D6Y1 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Ccdc3Q9D6Y1 Gm37495-201ENSMUST00000194590 264 ntBASIC4.09□□□□□ -1.75
Ccdc3Q9D6Y1 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Ccdc3Q9D6Y1 Gm4410-201ENSMUST00000199349 686 ntBASIC4.09□□□□□ -1.75
Ccdc3Q9D6Y1 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC4.09□□□□□ -1.75
Ccdc3Q9D6Y1 Gm9245-201ENSMUST00000200528 983 ntBASIC4.09□□□□□ -1.75
Ccdc3Q9D6Y1 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC4.09□□□□□ -1.75
Ccdc3Q9D6Y1 Gm44023-201ENSMUST00000203710 469 ntBASIC4.09□□□□□ -1.75
Ccdc3Q9D6Y1 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC4.09□□□□□ -1.75
Ccdc3Q9D6Y1 Gm34272-201ENSMUST00000208886 253 ntBASIC4.09□□□□□ -1.75
Ccdc3Q9D6Y1 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.09□□□□□ -1.75
Ccdc3Q9D6Y1 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Ccdc3Q9D6Y1 Gm18507-201ENSMUST00000218855 525 ntBASIC4.09□□□□□ -1.75
Ccdc3Q9D6Y1 AC134860.6-201ENSMUST00000226038 285 ntBASIC4.09□□□□□ -1.75
Ccdc3Q9D6Y1 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC4.09□□□□□ -1.75
Ccdc3Q9D6Y1 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Ccdc3Q9D6Y1 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
Ccdc3Q9D6Y1 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
Ccdc3Q9D6Y1 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.09□□□□□ -1.76
Ccdc3Q9D6Y1 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
Ccdc3Q9D6Y1 Gm43826-201ENSMUST00000199604 2612 ntBASIC4.08□□□□□ -1.76
Ccdc3Q9D6Y1 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
Ccdc3Q9D6Y1 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.08□□□□□ -1.76
Ccdc3Q9D6Y1 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.08□□□□□ -1.76
Ccdc3Q9D6Y1 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
Ccdc3Q9D6Y1 Gm26075-201ENSMUST00000104062 121 ntBASIC4.08□□□□□ -1.76
Ccdc3Q9D6Y1 Gm24788-201ENSMUST00000104283 156 ntBASIC4.08□□□□□ -1.76
Ccdc3Q9D6Y1 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
Ccdc3Q9D6Y1 Gm14861-201ENSMUST00000119451 455 ntBASIC4.08□□□□□ -1.76
Ccdc3Q9D6Y1 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.08□□□□□ -1.76
Ccdc3Q9D6Y1 Gm11448-201ENSMUST00000120427 450 ntBASIC4.08□□□□□ -1.76
Ccdc3Q9D6Y1 Gm6027-201ENSMUST00000121467 756 ntBASIC4.08□□□□□ -1.76
Ccdc3Q9D6Y1 Gm8200-201ENSMUST00000122390 222 ntBASIC4.08□□□□□ -1.76
Ccdc3Q9D6Y1 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Ccdc3Q9D6Y1 Gm4487-201ENSMUST00000150617 442 ntBASIC4.08□□□□□ -1.76
Ccdc3Q9D6Y1 Gm22084-201ENSMUST00000157585 105 ntBASIC4.08□□□□□ -1.76
Ccdc3Q9D6Y1 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Ccdc3Q9D6Y1 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
Ccdc3Q9D6Y1 Mir5106-201ENSMUST00000174936 73 ntBASIC4.08□□□□□ -1.76
Ccdc3Q9D6Y1 Gm27254-201ENSMUST00000183926 517 ntBASIC4.08□□□□□ -1.76
Ccdc3Q9D6Y1 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC4.08□□□□□ -1.76
Ccdc3Q9D6Y1 Gm18303-201ENSMUST00000190055 1176 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms