Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Ddx56Q9D0R4 Gm43594-201ENSMUST00000201153 3442 ntBASIC5.43□□□□□ -1.54
Ddx56Q9D0R4 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ddx56Q9D0R4 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.43□□□□□ -1.54
Ddx56Q9D0R4 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Ddx56Q9D0R4 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Ddx56Q9D0R4 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Ddx56Q9D0R4 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.43□□□□□ -1.54
Ddx56Q9D0R4 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
Ddx56Q9D0R4 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Ddx56Q9D0R4 AC170999.1-201ENSMUST00000226359 1585 ntBASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Gm31258-201ENSMUST00000194532 3297 ntBASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Gm25213-201ENSMUST00000102388 113 ntBASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Gm11486-201ENSMUST00000107322 478 ntBASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Gm14731-201ENSMUST00000119216 376 ntBASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Gm14521-201ENSMUST00000119545 350 ntBASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Gm11407-201ENSMUST00000120362 1058 ntBASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Gm1866-201ENSMUST00000120701 477 ntBASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Gm6305-201ENSMUST00000121027 1012 ntBASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Gm15878-201ENSMUST00000127561 306 ntBASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Gm16363-201ENSMUST00000132460 877 ntBASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Gm23385-201ENSMUST00000158592 295 ntBASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Gm19807-201ENSMUST00000173971 667 ntBASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Gm26925-201ENSMUST00000182470 957 ntBASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Gm7142-201ENSMUST00000194232 586 ntBASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Gm42438-201ENSMUST00000197832 974 ntBASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Gm43171-201ENSMUST00000199882 291 ntBASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Gm8189-203ENSMUST00000211159 1225 ntBASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 AC156803.1-201ENSMUST00000224407 820 ntBASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 AC161884.2-201ENSMUST00000224513 227 ntBASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 AC164597.2-201ENSMUST00000226738 603 ntBASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Mir199a-2-201ENSMUST00000093618 110 ntBASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Gm43498-201ENSMUST00000202002 1486 ntBASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Gm38125-201ENSMUST00000194136 3438 ntBASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Ddx56Q9D0R4 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm28394-201ENSMUST00000186805 1495 ntTSL 5 BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm28570-201ENSMUST00000188300 1495 ntTSL 5 BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm5715-201ENSMUST00000196854 1465 ntBASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm24170-201ENSMUST00000104124 133 ntBASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm14711-201ENSMUST00000117056 217 ntBASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm15772-201ENSMUST00000118533 438 ntBASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm13172-201ENSMUST00000118685 256 ntBASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm11481-201ENSMUST00000120069 255 ntBASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm11805-201ENSMUST00000121238 600 ntBASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm23837-201ENSMUST00000122656 286 ntBASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm23902-201ENSMUST00000157571 134 ntBASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm37421-201ENSMUST00000193088 132 ntBASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm34882-201ENSMUST00000193245 974 ntTSL 5 BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm8929-201ENSMUST00000197781 1132 ntBASIC5.41□□□□□ -1.54
Ddx56Q9D0R4 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC5.41□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 143.4 ms