Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm29634-201ENSMUST00000188467 696 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 Gm28116-201ENSMUST00000189064 387 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 Gm28699-201ENSMUST00000189193 696 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 Gm20811-201ENSMUST00000190500 553 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 Gm37399-201ENSMUST00000195224 416 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 9330198I05Rik-201ENSMUST00000196846 1095 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Clrn1Q8K445 Gm43856-201ENSMUST00000197004 369 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 Gm43054-201ENSMUST00000199495 884 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Clrn1Q8K445 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 Gm8911-201ENSMUST00000213986 652 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 CT025665.1-201ENSMUST00000215251 1199 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 Gm7034-201ENSMUST00000218638 645 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 AC153548.2-201ENSMUST00000219770 885 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 AC192333.6-201ENSMUST00000224565 725 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 AC140451.2-202ENSMUST00000226156 574 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 AC154436.2-201ENSMUST00000227408 208 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 AC123665.6-201ENSMUST00000228568 538 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 Olfr720-201ENSMUST00000035250 1023 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Clrn1Q8K445 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Clrn1Q8K445 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Clrn1Q8K445 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Clrn1Q8K445 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Clrn1Q8K445 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 AC116726.1-201ENSMUST00000215028 3497 ntBASIC5.03□□□□□ -1.6
Clrn1Q8K445 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Clrn1Q8K445 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Clrn1Q8K445 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC5.03□□□□□ -1.6
Clrn1Q8K445 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Clrn1Q8K445 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Clrn1Q8K445 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Clrn1Q8K445 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Clrn1Q8K445 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC5.02□□□□□ -1.61
Clrn1Q8K445 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Clrn1Q8K445 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC5.02□□□□□ -1.61
Clrn1Q8K445 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Clrn1Q8K445 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm35755-201ENSMUST00000222392 2077 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm23133-201ENSMUST00000104255 135 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm6429-201ENSMUST00000117144 475 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm13890-201ENSMUST00000117578 390 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm15060-201ENSMUST00000119550 948 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm15490-201ENSMUST00000119894 387 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 Mup-ps28-201ENSMUST00000120686 289 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm12900-201ENSMUST00000120919 573 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm11321-201ENSMUST00000121257 902 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm12413-201ENSMUST00000121508 312 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Clrn1Q8K445 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Clrn1Q8K445 Mir1970-201ENSMUST00000157839 104 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm24395-201ENSMUST00000158139 125 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm24216-201ENSMUST00000158259 117 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm22261-201ENSMUST00000158691 324 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC5.02□□□□□ -1.61
Clrn1Q8K445 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm27854-201ENSMUST00000175578 244 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 Mir7087-201ENSMUST00000184840 70 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm6543-201ENSMUST00000197353 808 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm17780-201ENSMUST00000207142 612 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm7624-201ENSMUST00000209702 435 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm45742-201ENSMUST00000212400 433 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 AC122332.1-201ENSMUST00000214384 285 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC5.02□□□□□ -1.61
Clrn1Q8K445 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm23614-201ENSMUST00000082598 107 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 Snora30-201ENSMUST00000083325 130 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 Mir7-2-201ENSMUST00000083675 97 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Clrn1Q8K445 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Clrn1Q8K445 AC163660.3-201ENSMUST00000224253 1563 ntBASIC5.02□□□□□ -1.61
Clrn1Q8K445 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms