Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC5.14□□□□□ -1.59
Nup88Q8CEC0 Gm37193-201ENSMUST00000193087 513 ntBASIC5.14□□□□□ -1.59
Nup88Q8CEC0 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC5.14□□□□□ -1.59
Nup88Q8CEC0 Gm18997-201ENSMUST00000216353 822 ntBASIC5.14□□□□□ -1.59
Nup88Q8CEC0 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC5.14□□□□□ -1.59
Nup88Q8CEC0 AC162376.1-201ENSMUST00000220120 435 ntBASIC5.14□□□□□ -1.59
Nup88Q8CEC0 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC5.14□□□□□ -1.59
Nup88Q8CEC0 AC154239.2-201ENSMUST00000227859 233 ntBASIC5.14□□□□□ -1.59
Nup88Q8CEC0 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Nup88Q8CEC0 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Nup88Q8CEC0 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Nup88Q8CEC0 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Nup88Q8CEC0 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Nup88Q8CEC0 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Nup88Q8CEC0 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Nup88Q8CEC0 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Gm14305-201ENSMUST00000108980 1167 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Gm15058-201ENSMUST00000117689 458 ntBASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Gm13359-201ENSMUST00000119000 695 ntBASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Gm13366-201ENSMUST00000122198 970 ntBASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Gm15212-201ENSMUST00000122403 466 ntBASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Gm25898-201ENSMUST00000158303 106 ntBASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Gm22646-201ENSMUST00000175130 115 ntBASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Gm27155-201ENSMUST00000183716 898 ntBASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Gm29228-201ENSMUST00000185489 418 ntBASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Gm10925-201ENSMUST00000189941 678 ntBASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Gm43478-201ENSMUST00000200381 292 ntBASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Gm43531-201ENSMUST00000200676 1114 ntBASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Olfr442-ps1-201ENSMUST00000204261 316 ntBASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Gm45499-201ENSMUST00000211656 280 ntBASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Gm2059-201ENSMUST00000212025 287 ntBASIC5.13□□□□□ -1.59
Nup88Q8CEC0 AC132104.1-201ENSMUST00000213615 260 ntBASIC5.13□□□□□ -1.59
Nup88Q8CEC0 AC154374.1-201ENSMUST00000215351 351 ntBASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Gm18487-201ENSMUST00000215826 878 ntBASIC5.13□□□□□ -1.59
Nup88Q8CEC0 AC122301.1-201ENSMUST00000219625 507 ntBASIC5.13□□□□□ -1.59
Nup88Q8CEC0 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC5.13□□□□□ -1.59
Nup88Q8CEC0 AC154305.1-201ENSMUST00000224443 450 ntBASIC5.13□□□□□ -1.59
Nup88Q8CEC0 AC129935.1-201ENSMUST00000226302 873 ntBASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Gm6863-201ENSMUST00000052882 636 ntBASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Gm8724-201ENSMUST00000081668 483 ntBASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Mir504-201ENSMUST00000093602 79 ntBASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Gm44897-201ENSMUST00000206187 1341 ntBASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Gm18954-201ENSMUST00000222200 1792 ntBASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Gm45235-201ENSMUST00000208016 4465 ntBASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Gm13058-201ENSMUST00000117097 1435 ntBASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Nup88Q8CEC0 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Gm37329-201ENSMUST00000192973 2057 ntBASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Gm42986-201ENSMUST00000201618 3385 ntBASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Gm23273-201ENSMUST00000104058 135 ntBASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Gm13788-201ENSMUST00000120767 601 ntBASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Gm14303-201ENSMUST00000121320 171 ntBASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Gm15141-201ENSMUST00000121860 729 ntBASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Gm4912-201ENSMUST00000122212 1044 ntBASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Gm16359-201ENSMUST00000124511 289 ntBASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Gm22637-201ENSMUST00000158144 283 ntBASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Gm23179-201ENSMUST00000158693 304 ntBASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Gm19807-201ENSMUST00000173971 667 ntBASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Gm21045-201ENSMUST00000183058 1020 ntBASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC5.12□□□□□ -1.59
Nup88Q8CEC0 Gm27254-201ENSMUST00000183926 517 ntBASIC5.12□□□□□ -1.59
Nup88Q8CEC0 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Nup88Q8CEC0 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms