Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm14878-201ENSMUST00000118167 293 ntBASIC6.66□□□□□ -1.34
Usp40Q8BWR4 Gm15120-201ENSMUST00000120602 301 ntBASIC6.66□□□□□ -1.34
Usp40Q8BWR4 Gm13121-201ENSMUST00000120637 632 ntBASIC6.66□□□□□ -1.34
Usp40Q8BWR4 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Usp40Q8BWR4 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC6.66□□□□□ -1.34
Usp40Q8BWR4 Gm22158-201ENSMUST00000158411 126 ntBASIC6.66□□□□□ -1.34
Usp40Q8BWR4 Gm26024-201ENSMUST00000158657 322 ntBASIC6.66□□□□□ -1.34
Usp40Q8BWR4 Gm20428-201ENSMUST00000174365 283 ntBASIC6.66□□□□□ -1.34
Usp40Q8BWR4 Mir6951-201ENSMUST00000183910 75 ntBASIC6.66□□□□□ -1.34
Usp40Q8BWR4 Gm9320-201ENSMUST00000184151 473 ntBASIC6.66□□□□□ -1.34
Usp40Q8BWR4 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Usp40Q8BWR4 Gm28700-201ENSMUST00000187614 579 ntBASIC6.66□□□□□ -1.34
Usp40Q8BWR4 Gm37123-201ENSMUST00000192994 1171 ntBASIC6.66□□□□□ -1.34
Usp40Q8BWR4 Trbv24-201ENSMUST00000194614 347 ntBASIC6.66□□□□□ -1.34
Usp40Q8BWR4 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC6.66□□□□□ -1.34
Usp40Q8BWR4 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Usp40Q8BWR4 Gm33626-201ENSMUST00000206790 828 ntBASIC6.66□□□□□ -1.34
Usp40Q8BWR4 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC6.66□□□□□ -1.34
Usp40Q8BWR4 Gm9373-201ENSMUST00000208724 599 ntBASIC6.66□□□□□ -1.34
Usp40Q8BWR4 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Usp40Q8BWR4 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC6.66□□□□□ -1.34
Usp40Q8BWR4 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC6.66□□□□□ -1.34
Usp40Q8BWR4 AC159619.2-201ENSMUST00000222924 401 ntBASIC6.66□□□□□ -1.34
Usp40Q8BWR4 CT030662.2-201ENSMUST00000226942 805 ntBASIC6.66□□□□□ -1.34
Usp40Q8BWR4 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC6.66□□□□□ -1.34
Usp40Q8BWR4 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Usp40Q8BWR4 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Usp40Q8BWR4 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Usp40Q8BWR4 Olfr221-202ENSMUST00000214071 3044 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Usp40Q8BWR4 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Usp40Q8BWR4 Gm43490-201ENSMUST00000197593 2652 ntBASIC6.66□□□□□ -1.34
Usp40Q8BWR4 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Usp40Q8BWR4 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC6.66□□□□□ -1.34
Usp40Q8BWR4 AC124579.1-201ENSMUST00000223468 2520 ntBASIC6.66□□□□□ -1.34
Usp40Q8BWR4 AC147639.2-202ENSMUST00000224834 1545 ntBASIC6.66□□□□□ -1.34
Usp40Q8BWR4 Gm44894-201ENSMUST00000205280 2174 ntBASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Gm11859-201ENSMUST00000118099 455 ntBASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Gm15333-201ENSMUST00000118825 364 ntBASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Gm16106-201ENSMUST00000119187 294 ntBASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Gm15034-201ENSMUST00000120043 349 ntBASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Gm23069-201ENSMUST00000158240 311 ntBASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Gm26402-201ENSMUST00000158499 113 ntBASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Gm15508-201ENSMUST00000160330 325 ntBASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Gm20612-201ENSMUST00000176318 236 ntBASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Gm27568-201ENSMUST00000184220 99 ntBASIC6.65□□□□□ -1.34
Usp40Q8BWR4 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Gm19206-201ENSMUST00000186401 827 ntBASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Gm18350-201ENSMUST00000187395 955 ntBASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Gm28803-201ENSMUST00000190385 764 ntBASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Gm37209-201ENSMUST00000194109 1276 ntBASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Mirlet7e-201ENSMUST00000196737 93 ntBASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC6.65□□□□□ -1.34
Usp40Q8BWR4 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC6.65□□□□□ -1.34
Usp40Q8BWR4 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC6.65□□□□□ -1.34
Usp40Q8BWR4 AC117202.2-201ENSMUST00000226491 1101 ntBASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC6.65□□□□□ -1.34
Usp40Q8BWR4 Mir27a-201ENSMUST00000083510 87 ntBASIC6.65□□□□□ -1.34
Usp40Q8BWR4 AC159326.1-201ENSMUST00000219989 1302 ntBASIC6.65□□□□□ -1.35
Usp40Q8BWR4 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.35
Usp40Q8BWR4 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
Usp40Q8BWR4 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Usp40Q8BWR4 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Usp40Q8BWR4 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Usp40Q8BWR4 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Usp40Q8BWR4 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC6.65□□□□□ -1.35
Usp40Q8BWR4 Gm43266-201ENSMUST00000201049 1771 ntBASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Usp40Q8BWR4 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Gm16082-201ENSMUST00000115992 377 ntBASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Gm13808-201ENSMUST00000121353 184 ntBASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Gm23867-201ENSMUST00000122649 274 ntBASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Gm25846-201ENSMUST00000158013 135 ntBASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Igkv17-134-201ENSMUST00000168310 348 ntBASIC6.64□□□□□ -1.35
Usp40Q8BWR4 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Usp40Q8BWR4 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Gm27564-201ENSMUST00000185196 96 ntBASIC6.64□□□□□ -1.35
Usp40Q8BWR4 Gm5734-201ENSMUST00000189787 913 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms