Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC5.06□□□□□ -1.6
Sp140Q6NSQ5 Gm28414-201ENSMUST00000190111 294 ntBASIC5.06□□□□□ -1.6
Sp140Q6NSQ5 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Sp140Q6NSQ5 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Sp140Q6NSQ5 Gm42694-201ENSMUST00000196951 358 ntBASIC5.06□□□□□ -1.6
Sp140Q6NSQ5 Gm42958-201ENSMUST00000197595 318 ntBASIC5.06□□□□□ -1.6
Sp140Q6NSQ5 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Sp140Q6NSQ5 Gm43367-201ENSMUST00000199986 625 ntBASIC5.06□□□□□ -1.6
Sp140Q6NSQ5 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.06□□□□□ -1.6
Sp140Q6NSQ5 Gm18691-201ENSMUST00000203593 872 ntBASIC5.06□□□□□ -1.6
Sp140Q6NSQ5 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC5.06□□□□□ -1.6
Sp140Q6NSQ5 Gm19599-201ENSMUST00000218898 358 ntBASIC5.06□□□□□ -1.6
Sp140Q6NSQ5 AC131720.3-201ENSMUST00000219113 275 ntBASIC5.06□□□□□ -1.6
Sp140Q6NSQ5 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC5.06□□□□□ -1.6
Sp140Q6NSQ5 AC154583.1-201ENSMUST00000224788 655 ntBASIC5.06□□□□□ -1.6
Sp140Q6NSQ5 AC121960.3-201ENSMUST00000227077 623 ntBASIC5.06□□□□□ -1.6
Sp140Q6NSQ5 AC138765.1-201ENSMUST00000228657 385 ntBASIC5.06□□□□□ -1.6
Sp140Q6NSQ5 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Sp140Q6NSQ5 Gm25187-201ENSMUST00000083906 133 ntBASIC5.06□□□□□ -1.6
Sp140Q6NSQ5 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Sp140Q6NSQ5 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sp140Q6NSQ5 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sp140Q6NSQ5 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.06□□□□□ -1.6
Sp140Q6NSQ5 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC5.06□□□□□ -1.6
Sp140Q6NSQ5 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC5.06□□□□□ -1.6
Sp140Q6NSQ5 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Sp140Q6NSQ5 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Sp140Q6NSQ5 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Sp140Q6NSQ5 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 AC159188.2-201ENSMUST00000224103 1301 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Zfp640-202ENSMUST00000224116 1562 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm25418-201ENSMUST00000104214 129 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm8202-201ENSMUST00000117682 310 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm12901-201ENSMUST00000118690 532 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm12448-201ENSMUST00000118852 655 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Hbb-bh3-201ENSMUST00000118954 266 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm13537-201ENSMUST00000120467 267 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm14125-202ENSMUST00000120921 756 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm14413-201ENSMUST00000122158 408 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm22390-201ENSMUST00000157588 325 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm25185-201ENSMUST00000157754 96 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm27976-201ENSMUST00000183635 162 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Mir6416-201ENSMUST00000183664 117 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm29509-201ENSMUST00000185716 321 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm29600-201ENSMUST00000188687 377 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm5842-201ENSMUST00000195073 622 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm8929-201ENSMUST00000197781 1132 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm43171-201ENSMUST00000199882 291 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm44776-201ENSMUST00000207212 381 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm8189-203ENSMUST00000211159 1225 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm18228-201ENSMUST00000217297 1091 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm6906-201ENSMUST00000218014 569 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 AC174797.2-203ENSMUST00000224017 716 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 AC154329.2-201ENSMUST00000225257 383 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm26176-201ENSMUST00000083795 105 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Gm2987-201ENSMUST00000187673 1693 ntBASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.05□□□□□ -1.6
Sp140Q6NSQ5 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Sp140Q6NSQ5 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Sp140Q6NSQ5 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.04□□□□□ -1.6
Sp140Q6NSQ5 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Sp140Q6NSQ5 Gm43313-201ENSMUST00000201398 2235 ntBASIC5.04□□□□□ -1.6
Sp140Q6NSQ5 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 101.8 ms