Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.46□□□□□ -1.7
Upf3aQ3ULJ3 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Upf3aQ3ULJ3 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Upf3aQ3ULJ3 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Upf3aQ3ULJ3 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Upf3aQ3ULJ3 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Upf3aQ3ULJ3 Gm43065-201ENSMUST00000198971 2092 ntBASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Gm15553-201ENSMUST00000118757 430 ntBASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Gm14473-201ENSMUST00000122269 557 ntBASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Gm24850-201ENSMUST00000158029 119 ntBASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Gm22156-201ENSMUST00000158409 141 ntBASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Mir1251-201ENSMUST00000175486 84 ntBASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Gm27036-201ENSMUST00000182465 980 ntBASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Scgb2b6-201ENSMUST00000188132 330 ntBASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Gm28830-201ENSMUST00000188192 213 ntBASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Gm37293-201ENSMUST00000191658 295 ntBASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Gm37241-201ENSMUST00000191736 523 ntBASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Gm38150-201ENSMUST00000192996 452 ntBASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Gm43304-201ENSMUST00000196803 326 ntBASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 CT025523.1-201ENSMUST00000228318 694 ntBASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Mir132-201ENSMUST00000083603 66 ntBASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Upf3aQ3ULJ3 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 Gm7451-201ENSMUST00000208382 1392 ntBASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 Gm45885-202ENSMUST00000211520 1383 ntBASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 Gm12760-201ENSMUST00000117861 482 ntBASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 Gm14282-201ENSMUST00000119484 240 ntBASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 Gm17421-201ENSMUST00000167845 674 ntBASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 Gm28118-201ENSMUST00000185957 294 ntBASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 Gm18507-201ENSMUST00000218855 525 ntBASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 AC163621.2-201ENSMUST00000222229 682 ntBASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 AC106830.1-201ENSMUST00000228032 1003 ntBASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 Gm7117-201ENSMUST00000071515 387 ntBASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 Gm10916-201ENSMUST00000080330 483 ntBASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Upf3aQ3ULJ3 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Upf3aQ3ULJ3 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Upf3aQ3ULJ3 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.43□□□□□ -1.7
Upf3aQ3ULJ3 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Upf3aQ3ULJ3 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Upf3aQ3ULJ3 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Upf3aQ3ULJ3 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Upf3aQ3ULJ3 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Upf3aQ3ULJ3 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Upf3aQ3ULJ3 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Upf3aQ3ULJ3 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Upf3aQ3ULJ3 Gm15364-201ENSMUST00000119618 585 ntBASIC4.43□□□□□ -1.7
Upf3aQ3ULJ3 Gm12087-201ENSMUST00000121878 258 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms