Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 AC174797.3-203ENSMUST00000225749 2078 ntBASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Trafd1Q3UDK1 AC123705.2-201ENSMUST00000221653 2009 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Snord66-201ENSMUST00000104051 75 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Gm24067-201ENSMUST00000104514 85 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Gm25726-201ENSMUST00000104529 129 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Gm14854-201ENSMUST00000117758 841 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Gm12507-201ENSMUST00000119155 415 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Gm14710-201ENSMUST00000146082 1066 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Gm24664-201ENSMUST00000158939 100 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Gm27883-201ENSMUST00000183941 102 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Gm29634-201ENSMUST00000188467 696 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Gm28699-201ENSMUST00000189193 696 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Gm18452-201ENSMUST00000202968 1111 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Gm45006-201ENSMUST00000206078 690 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 AC153516.1-201ENSMUST00000217955 779 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 AC154738.2-201ENSMUST00000227403 1110 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 CT030662.3-201ENSMUST00000228751 476 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Gm23099-201ENSMUST00000083454 139 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Gm44567-201ENSMUST00000205645 2631 ntBASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trafd1Q3UDK1 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.73
Trafd1Q3UDK1 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
Trafd1Q3UDK1 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.21□□□□□ -1.73
Trafd1Q3UDK1 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Trafd1Q3UDK1 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Gm23226-201ENSMUST00000116927 103 ntBASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Gm15403-201ENSMUST00000119343 1227 ntBASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Gm12849-201ENSMUST00000120013 739 ntBASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Gm11349-201ENSMUST00000122209 1116 ntBASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Gm26371-201ENSMUST00000157829 104 ntBASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Gm22211-201ENSMUST00000158097 156 ntBASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Gm17109-201ENSMUST00000163985 358 ntBASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Gm27896-201ENSMUST00000175162 317 ntBASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Mir6414-201ENSMUST00000183685 82 ntBASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Gm27805-201ENSMUST00000184513 79 ntBASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Gm27414-201ENSMUST00000185033 381 ntBASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Ighv10-4-201ENSMUST00000193702 299 ntBASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Gm37712-201ENSMUST00000194295 647 ntTSL 3 BASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Gm19131-201ENSMUST00000203408 789 ntBASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Gm6303-201ENSMUST00000210123 471 ntBASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 AC161250.1-201ENSMUST00000213426 1111 ntBASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Gm8942-201ENSMUST00000217892 400 ntBASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 AC153532.1-201ENSMUST00000218126 1111 ntBASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 AC168881.1-201ENSMUST00000226018 430 ntBASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Gm23464-201ENSMUST00000083145 147 ntBASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Gm7381-201ENSMUST00000098958 300 ntBASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Gm42717-201ENSMUST00000197309 3463 ntBASIC4.21□□□□□ -1.74
Trafd1Q3UDK1 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms