Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC5.71□□□□□ -1.5
Hmgb1P63158 Mir6417-201ENSMUST00000183815 116 ntBASIC5.71□□□□□ -1.5
Hmgb1P63158 Mir6244-201ENSMUST00000184156 117 ntBASIC5.71□□□□□ -1.5
Hmgb1P63158 Gm38131-201ENSMUST00000192449 430 ntBASIC5.71□□□□□ -1.5
Hmgb1P63158 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Hmgb1P63158 Gm19253-201ENSMUST00000204279 307 ntBASIC5.71□□□□□ -1.5
Hmgb1P63158 Gm44820-201ENSMUST00000207420 396 ntBASIC5.71□□□□□ -1.5
Hmgb1P63158 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC5.71□□□□□ -1.5
Hmgb1P63158 AC158803.2-201ENSMUST00000219452 679 ntBASIC5.71□□□□□ -1.5
Hmgb1P63158 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.71□□□□□ -1.5
Hmgb1P63158 AC238676.3-201ENSMUST00000223042 154 ntBASIC5.71□□□□□ -1.5
Hmgb1P63158 Vmn1r214-201ENSMUST00000074252 1227 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Hmgb1P63158 n-R5s168-201ENSMUST00000083948 104 ntBASIC5.71□□□□□ -1.5
Hmgb1P63158 Gm22864-201ENSMUST00000083950 130 ntBASIC5.71□□□□□ -1.5
Hmgb1P63158 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hmgb1P63158 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hmgb1P63158 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.71□□□□□ -1.5
Hmgb1P63158 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Hmgb1P63158 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.71□□□□□ -1.5
Hmgb1P63158 Svet1-201ENSMUST00000209370 3940 ntBASIC5.71□□□□□ -1.5
Hmgb1P63158 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hmgb1P63158 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC5.71□□□□□ -1.5
Hmgb1P63158 AC167420.1-201ENSMUST00000222999 2121 ntBASIC5.71□□□□□ -1.5
Hmgb1P63158 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Hmgb1P63158 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
Hmgb1P63158 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Hmgb1P63158 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hmgb1P63158 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hmgb1P63158 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hmgb1P63158 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.7□□□□□ -1.5
Hmgb1P63158 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hmgb1P63158 Gm14086-201ENSMUST00000117152 173 ntBASIC5.7□□□□□ -1.5
Hmgb1P63158 Gm14238-201ENSMUST00000120227 323 ntBASIC5.7□□□□□ -1.5
Hmgb1P63158 Gm25176-201ENSMUST00000122640 125 ntBASIC5.7□□□□□ -1.5
Hmgb1P63158 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.7□□□□□ -1.5
Hmgb1P63158 Gm23465-201ENSMUST00000157134 262 ntBASIC5.7□□□□□ -1.5
Hmgb1P63158 Gm3053-201ENSMUST00000161709 616 ntBASIC5.7□□□□□ -1.5
Hmgb1P63158 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC5.7□□□□□ -1.5
Hmgb1P63158 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hmgb1P63158 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hmgb1P63158 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC5.7□□□□□ -1.5
Hmgb1P63158 Gm10784-201ENSMUST00000178715 238 ntBASIC5.7□□□□□ -1.5
Hmgb1P63158 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hmgb1P63158 Mir7082-201ENSMUST00000183526 92 ntBASIC5.7□□□□□ -1.5
Hmgb1P63158 Gm18667-201ENSMUST00000186523 484 ntBASIC5.7□□□□□ -1.5
Hmgb1P63158 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Hmgb1P63158 Gm38011-201ENSMUST00000193312 279 ntBASIC5.7□□□□□ -1.5
Hmgb1P63158 Gm37659-201ENSMUST00000194574 111 ntBASIC5.7□□□□□ -1.5
Hmgb1P63158 Gm42753-201ENSMUST00000196718 1268 ntBASIC5.7□□□□□ -1.5
Hmgb1P63158 Gm4321-201ENSMUST00000200520 442 ntBASIC5.7□□□□□ -1.5
Hmgb1P63158 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.7□□□□□ -1.5
Hmgb1P63158 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hmgb1P63158 4930503L19Rik-203ENSMUST00000212074 1210 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hmgb1P63158 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC5.7□□□□□ -1.5
Hmgb1P63158 AC156504.1-201ENSMUST00000214608 157 ntBASIC5.7□□□□□ -1.5
Hmgb1P63158 AC127279.1-201ENSMUST00000220140 637 ntBASIC5.7□□□□□ -1.5
Hmgb1P63158 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC5.7□□□□□ -1.5
Hmgb1P63158 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Hmgb1P63158 AC122858.3-201ENSMUST00000226341 740 ntBASIC5.7□□□□□ -1.5
Hmgb1P63158 AC122858.1-202ENSMUST00000228290 986 ntBASIC5.7□□□□□ -1.5
Hmgb1P63158 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Hmgb1P63158 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Hmgb1P63158 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Hmgb1P63158 Gm25139-201ENSMUST00000083247 210 ntBASIC5.7□□□□□ -1.5
Hmgb1P63158 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Hmgb1P63158 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hmgb1P63158 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hmgb1P63158 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Hmgb1P63158 Gm7135-202ENSMUST00000191257 1905 ntBASIC5.7□□□□□ -1.5
Hmgb1P63158 Vmn2r80-201ENSMUST00000165834 2690 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Hmgb1P63158 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hmgb1P63158 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Hmgb1P63158 Gm10484-201ENSMUST00000196372 4759 ntBASIC5.69□□□□□ -1.5
Hmgb1P63158 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Hmgb1P63158 Gm43209-201ENSMUST00000198949 1588 ntBASIC5.69□□□□□ -1.5
Hmgb1P63158 Gm42728-201ENSMUST00000202644 1552 ntBASIC5.69□□□□□ -1.5
Hmgb1P63158 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Hmgb1P63158 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Hmgb1P63158 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Hmgb1P63158 Gm13678-201ENSMUST00000118926 340 ntBASIC5.69□□□□□ -1.5
Hmgb1P63158 Gm14335-201ENSMUST00000119165 810 ntBASIC5.69□□□□□ -1.5
Hmgb1P63158 Gm15428-201ENSMUST00000121352 333 ntBASIC5.69□□□□□ -1.5
Hmgb1P63158 Gm13973-201ENSMUST00000121371 894 ntBASIC5.69□□□□□ -1.5
Hmgb1P63158 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Hmgb1P63158 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC5.69□□□□□ -1.5
Hmgb1P63158 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Hmgb1P63158 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Hmgb1P63158 Gm24343-201ENSMUST00000158708 111 ntBASIC5.69□□□□□ -1.5
Hmgb1P63158 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Hmgb1P63158 Gm27854-201ENSMUST00000175578 244 ntBASIC5.69□□□□□ -1.5
Hmgb1P63158 Gm24300-201ENSMUST00000177809 109 ntBASIC5.69□□□□□ -1.5
Hmgb1P63158 Gm24017-201ENSMUST00000178726 109 ntBASIC5.69□□□□□ -1.5
Hmgb1P63158 Gm23952-201ENSMUST00000179380 109 ntBASIC5.69□□□□□ -1.5
Hmgb1P63158 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Hmgb1P63158 Mir7220-201ENSMUST00000183978 60 ntBASIC5.69□□□□□ -1.5
Hmgb1P63158 Cox6b2-209ENSMUST00000184143 435 ntTSL 2 BASIC5.69□□□□□ -1.5
Hmgb1P63158 Gm38097-201ENSMUST00000192936 439 ntBASIC5.69□□□□□ -1.5
Hmgb1P63158 Gm5285-201ENSMUST00000193089 666 ntBASIC5.69□□□□□ -1.5
Hmgb1P63158 Igkv15-101-201ENSMUST00000195917 299 ntBASIC5.69□□□□□ -1.5
Hmgb1P63158 n-TStga1-201ENSMUST00000199903 109 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms