Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm45854-201ENSMUST00000211857 3488 ntBASIC6.1□□□□□ -1.43
Cux1P53564 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Cux1P53564 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
Cux1P53564 Gm22115-201ENSMUST00000103976 133 ntBASIC6.09□□□□□ -1.43
Cux1P53564 Gm23923-201ENSMUST00000104108 133 ntBASIC6.09□□□□□ -1.43
Cux1P53564 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC6.09□□□□□ -1.43
Cux1P53564 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC6.09□□□□□ -1.43
Cux1P53564 Mir7676-1-201ENSMUST00000183491 62 ntBASIC6.09□□□□□ -1.43
Cux1P53564 Mir7676-2-201ENSMUST00000183523 62 ntBASIC6.09□□□□□ -1.43
Cux1P53564 Gm27249-201ENSMUST00000185049 328 ntBASIC6.09□□□□□ -1.43
Cux1P53564 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC6.09□□□□□ -1.43
Cux1P53564 AC152415.1-201ENSMUST00000213320 440 ntBASIC6.09□□□□□ -1.43
Cux1P53564 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC6.09□□□□□ -1.43
Cux1P53564 AC133283.1-201ENSMUST00000228443 859 ntBASIC6.09□□□□□ -1.43
Cux1P53564 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.43
Cux1P53564 Gm23925-201ENSMUST00000082471 132 ntBASIC6.09□□□□□ -1.43
Cux1P53564 Gm24626-201ENSMUST00000082621 161 ntBASIC6.09□□□□□ -1.43
Cux1P53564 Gm24147-201ENSMUST00000082763 144 ntBASIC6.09□□□□□ -1.43
Cux1P53564 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cux1P53564 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC6.09□□□□□ -1.43
Cux1P53564 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Cux1P53564 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cux1P53564 Gm28359-201ENSMUST00000187470 1322 ntBASIC6.09□□□□□ -1.43
Cux1P53564 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cux1P53564 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Cux1P53564 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Cux1P53564 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cux1P53564 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Cux1P53564 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC6.09□□□□□ -1.43
Cux1P53564 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
Cux1P53564 Gm14739-201ENSMUST00000120424 802 ntBASIC6.09□□□□□ -1.44
Cux1P53564 Mir1934-201ENSMUST00000158127 83 ntBASIC6.09□□□□□ -1.44
Cux1P53564 Gm6625-201ENSMUST00000177870 272 ntBASIC6.09□□□□□ -1.44
Cux1P53564 Gm37828-201ENSMUST00000192496 432 ntBASIC6.09□□□□□ -1.44
Cux1P53564 Gm43315-201ENSMUST00000198120 313 ntBASIC6.09□□□□□ -1.44
Cux1P53564 Gm19154-201ENSMUST00000223330 940 ntBASIC6.09□□□□□ -1.44
Cux1P53564 AC158142.1-201ENSMUST00000226721 416 ntBASIC6.09□□□□□ -1.44
Cux1P53564 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Cux1P53564 AC137842.3-201ENSMUST00000228855 2397 ntBASIC6.09□□□□□ -1.44
Cux1P53564 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cux1P53564 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
Cux1P53564 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cux1P53564 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cux1P53564 Gm44120-201ENSMUST00000203022 3023 ntBASIC6.08□□□□□ -1.44
Cux1P53564 Gm42520-201ENSMUST00000199642 1502 ntBASIC6.08□□□□□ -1.44
Cux1P53564 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Cux1P53564 Gm15613-201ENSMUST00000118396 326 ntBASIC6.08□□□□□ -1.44
Cux1P53564 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC6.08□□□□□ -1.44
Cux1P53564 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC6.08□□□□□ -1.44
Cux1P53564 Gm25105-201ENSMUST00000122477 130 ntBASIC6.08□□□□□ -1.44
Cux1P53564 Gm22380-201ENSMUST00000157479 95 ntBASIC6.08□□□□□ -1.44
Cux1P53564 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
Cux1P53564 Gm20399-201ENSMUST00000174652 132 ntBASIC6.08□□□□□ -1.44
Cux1P53564 Gm6075-201ENSMUST00000186816 486 ntBASIC6.08□□□□□ -1.44
Cux1P53564 Gm28654-201ENSMUST00000189801 379 ntBASIC6.08□□□□□ -1.44
Cux1P53564 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC6.08□□□□□ -1.44
Cux1P53564 Gm45162-201ENSMUST00000209013 618 ntBASIC6.08□□□□□ -1.44
Cux1P53564 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Cux1P53564 AC135377.1-201ENSMUST00000223692 463 ntBASIC6.08□□□□□ -1.44
Cux1P53564 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
Cux1P53564 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Cux1P53564 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cux1P53564 Gm37781-201ENSMUST00000194773 3218 ntBASIC6.07□□□□□ -1.44
Cux1P53564 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Cux1P53564 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Cux1P53564 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cux1P53564 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC6.07□□□□□ -1.44
Cux1P53564 Gm15060-201ENSMUST00000119550 948 ntBASIC6.07□□□□□ -1.44
Cux1P53564 Gm12691-201ENSMUST00000120186 456 ntBASIC6.07□□□□□ -1.44
Cux1P53564 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Cux1P53564 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Cux1P53564 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC6.07□□□□□ -1.44
Cux1P53564 Gm37617-201ENSMUST00000194309 159 ntBASIC6.07□□□□□ -1.44
Cux1P53564 Gm29704-201ENSMUST00000196011 253 ntBASIC6.07□□□□□ -1.44
Cux1P53564 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC6.07□□□□□ -1.44
Cux1P53564 Gm6240-201ENSMUST00000208014 473 ntBASIC6.07□□□□□ -1.44
Cux1P53564 AC161054.1-201ENSMUST00000214319 184 ntBASIC6.07□□□□□ -1.44
Cux1P53564 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC6.07□□□□□ -1.44
Cux1P53564 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Cux1P53564 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Cux1P53564 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Cux1P53564 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Cux1P53564 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Cux1P53564 Gm38073-201ENSMUST00000195141 3665 ntBASIC6.06□□□□□ -1.44
Cux1P53564 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Cux1P53564 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Cux1P53564 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cux1P53564 Gm11566-201ENSMUST00000118550 203 ntBASIC6.06□□□□□ -1.44
Cux1P53564 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC6.06□□□□□ -1.44
Cux1P53564 Gm13118-201ENSMUST00000120402 549 ntBASIC6.06□□□□□ -1.44
Cux1P53564 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC6.06□□□□□ -1.44
Cux1P53564 Gm22840-201ENSMUST00000158444 136 ntBASIC6.06□□□□□ -1.44
Cux1P53564 Gm15795-201ENSMUST00000160969 553 ntBASIC6.06□□□□□ -1.44
Cux1P53564 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC6.06□□□□□ -1.44
Cux1P53564 Gm7041-201ENSMUST00000201227 524 ntBASIC6.06□□□□□ -1.44
Cux1P53564 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC6.06□□□□□ -1.44
Cux1P53564 Gm44681-201ENSMUST00000208447 842 ntBASIC6.06□□□□□ -1.44
Cux1P53564 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC6.06□□□□□ -1.44
Cux1P53564 Gm37498-201ENSMUST00000193524 4002 ntBASIC6.06□□□□□ -1.44
Cux1P53564 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms