Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm25195-201ENSMUST00000177656 126 ntBASIC3.97□□□□□ -1.77
Cdx2P43241 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Cdx2P43241 Gm27190-201ENSMUST00000184890 542 ntBASIC3.97□□□□□ -1.77
Cdx2P43241 Gm43649-201ENSMUST00000196596 391 ntBASIC3.97□□□□□ -1.77
Cdx2P43241 Gm19104-201ENSMUST00000198392 679 ntBASIC3.97□□□□□ -1.77
Cdx2P43241 Gm45200-201ENSMUST00000207434 919 ntBASIC3.97□□□□□ -1.77
Cdx2P43241 Gm44623-201ENSMUST00000207934 434 ntBASIC3.97□□□□□ -1.77
Cdx2P43241 Gm34779-201ENSMUST00000210036 263 ntBASIC3.97□□□□□ -1.77
Cdx2P43241 Gm17829-201ENSMUST00000219782 344 ntBASIC3.97□□□□□ -1.77
Cdx2P43241 AC155266.1-201ENSMUST00000220762 904 ntBASIC3.97□□□□□ -1.77
Cdx2P43241 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC3.97□□□□□ -1.77
Cdx2P43241 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Cdx2P43241 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.97□□□□□ -1.77
Cdx2P43241 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Cdx2P43241 Olfr1242-201ENSMUST00000099777 1053 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Cdx2P43241 Gm37639-201ENSMUST00000191623 2785 ntBASIC3.97□□□□□ -1.77
Cdx2P43241 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC3.97□□□□□ -1.77
Cdx2P43241 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Cdx2P43241 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Cdx2P43241 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Cdx2P43241 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
Cdx2P43241 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
Cdx2P43241 Gm43329-201ENSMUST00000200120 3232 ntBASIC3.97□□□□□ -1.77
Cdx2P43241 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.77
Cdx2P43241 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
Cdx2P43241 Gm43260-201ENSMUST00000197378 2430 ntBASIC3.96□□□□□ -1.77
Cdx2P43241 Ankrd28-204ENSMUST00000227089 3522 ntBASIC3.96□□□□□ -1.77
Cdx2P43241 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
Cdx2P43241 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
Cdx2P43241 Gm43065-201ENSMUST00000198971 2092 ntBASIC3.96□□□□□ -1.77
Cdx2P43241 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
Cdx2P43241 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx2P43241 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx2P43241 Gm14605-201ENSMUST00000120599 268 ntBASIC3.96□□□□□ -1.78
Cdx2P43241 Gm15885-201ENSMUST00000122114 388 ntBASIC3.96□□□□□ -1.78
Cdx2P43241 Gm24553-201ENSMUST00000158653 131 ntBASIC3.96□□□□□ -1.78
Cdx2P43241 Vmn1r181-201ENSMUST00000181796 1080 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Cdx2P43241 Gm21045-201ENSMUST00000183058 1020 ntBASIC3.96□□□□□ -1.78
Cdx2P43241 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC3.96□□□□□ -1.78
Cdx2P43241 Gm17953-201ENSMUST00000192061 667 ntBASIC3.96□□□□□ -1.78
Cdx2P43241 Gm43856-201ENSMUST00000197004 369 ntBASIC3.96□□□□□ -1.78
Cdx2P43241 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC3.96□□□□□ -1.78
Cdx2P43241 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC3.96□□□□□ -1.78
Cdx2P43241 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC3.96□□□□□ -1.78
Cdx2P43241 Gm18377-201ENSMUST00000215141 607 ntBASIC3.96□□□□□ -1.78
Cdx2P43241 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.96□□□□□ -1.78
Cdx2P43241 AC139750.2-201ENSMUST00000224424 386 ntBASIC3.96□□□□□ -1.78
Cdx2P43241 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Cdx2P43241 Olfr1325-201ENSMUST00000054541 948 ntAPPRIS P2 BASIC3.96□□□□□ -1.78
Cdx2P43241 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Cdx2P43241 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Cdx2P43241 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Cdx2P43241 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Cdx2P43241 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Cdx2P43241 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx2P43241 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx2P43241 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx2P43241 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC3.96□□□□□ -1.78
Cdx2P43241 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Cdx2P43241 Gm37011-201ENSMUST00000195543 2935 ntBASIC3.96□□□□□ -1.78
Cdx2P43241 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Cdx2P43241 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
Cdx2P43241 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Cdx2P43241 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Cdx2P43241 AC135119.1-201ENSMUST00000227935 3717 ntBASIC3.95□□□□□ -1.78
Cdx2P43241 Gm11877-201ENSMUST00000118921 852 ntBASIC3.95□□□□□ -1.78
Cdx2P43241 Gm12458-201ENSMUST00000119387 495 ntBASIC3.95□□□□□ -1.78
Cdx2P43241 Gm14991-201ENSMUST00000119913 598 ntBASIC3.95□□□□□ -1.78
Cdx2P43241 Gm15014-201ENSMUST00000120742 258 ntBASIC3.95□□□□□ -1.78
Cdx2P43241 Gm11656-201ENSMUST00000137462 395 ntTSL 5 BASIC3.95□□□□□ -1.78
Cdx2P43241 Gm26148-201ENSMUST00000157430 68 ntBASIC3.95□□□□□ -1.78
Cdx2P43241 Gm22383-201ENSMUST00000158188 327 ntBASIC3.95□□□□□ -1.78
Cdx2P43241 Gm22857-201ENSMUST00000174969 134 ntBASIC3.95□□□□□ -1.78
Cdx2P43241 4933433F19Rik-201ENSMUST00000180571 1088 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Cdx2P43241 Gm28396-201ENSMUST00000190309 379 ntBASIC3.95□□□□□ -1.78
Cdx2P43241 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Cdx2P43241 Gm43424-201ENSMUST00000200484 253 ntBASIC3.95□□□□□ -1.78
Cdx2P43241 Gm43892-201ENSMUST00000204373 265 ntBASIC3.95□□□□□ -1.78
Cdx2P43241 Gm44765-201ENSMUST00000206927 601 ntBASIC3.95□□□□□ -1.78
Cdx2P43241 Gm45498-201ENSMUST00000210346 283 ntBASIC3.95□□□□□ -1.78
Cdx2P43241 Gm18487-201ENSMUST00000215826 878 ntBASIC3.95□□□□□ -1.78
Cdx2P43241 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC3.95□□□□□ -1.78
Cdx2P43241 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC3.95□□□□□ -1.78
Cdx2P43241 AC140209.1-201ENSMUST00000227875 284 ntBASIC3.95□□□□□ -1.78
Cdx2P43241 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Cdx2P43241 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Cdx2P43241 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Cdx2P43241 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Cdx2P43241 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Cdx2P43241 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Cdx2P43241 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Cdx2P43241 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Cdx2P43241 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Cdx2P43241 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Cdx2P43241 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Cdx2P43241 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Cdx2P43241 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
Cdx2P43241 Gm37900-201ENSMUST00000195510 3805 ntBASIC3.94□□□□□ -1.78
Cdx2P43241 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
Cdx2P43241 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms