Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm11471-201ENSMUST00000121824 198 ntBASIC4.11□□□□□ -1.75
HttP42859 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HttP42859 Gm6680-201ENSMUST00000192789 950 ntBASIC4.11□□□□□ -1.75
HttP42859 Gm18482-201ENSMUST00000202405 760 ntBASIC4.11□□□□□ -1.75
HttP42859 AL645546.1-201ENSMUST00000225001 189 ntBASIC4.11□□□□□ -1.75
HttP42859 AC166369.1-201ENSMUST00000228126 351 ntBASIC4.11□□□□□ -1.75
HttP42859 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HttP42859 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HttP42859 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HttP42859 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
HttP42859 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
HttP42859 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.11□□□□□ -1.75
HttP42859 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HttP42859 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
HttP42859 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HttP42859 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
HttP42859 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
HttP42859 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC4.1□□□□□ -1.75
HttP42859 Gm11233-201ENSMUST00000122357 634 ntBASIC4.1□□□□□ -1.75
HttP42859 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC4.1□□□□□ -1.75
HttP42859 Gm26991-201ENSMUST00000180950 620 ntBASIC4.1□□□□□ -1.75
HttP42859 Gm43036-201ENSMUST00000200594 373 ntBASIC4.1□□□□□ -1.75
HttP42859 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.1□□□□□ -1.75
HttP42859 AC113031.3-201ENSMUST00000226552 190 ntBASIC4.1□□□□□ -1.75
HttP42859 Snord35b-201ENSMUST00000082833 87 ntBASIC4.1□□□□□ -1.75
HttP42859 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
HttP42859 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
HttP42859 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
HttP42859 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC4.1□□□□□ -1.75
HttP42859 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HttP42859 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
HttP42859 Gm12245-201ENSMUST00000117266 357 ntBASIC4.1□□□□□ -1.75
HttP42859 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC4.1□□□□□ -1.75
HttP42859 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC4.1□□□□□ -1.75
HttP42859 Gm28282-201ENSMUST00000186072 186 ntBASIC4.1□□□□□ -1.75
HttP42859 Gm19503-201ENSMUST00000187109 241 ntBASIC4.1□□□□□ -1.75
HttP42859 Gm44927-201ENSMUST00000207573 716 ntBASIC4.1□□□□□ -1.75
HttP42859 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
HttP42859 Gm37639-201ENSMUST00000191623 2785 ntBASIC4.1□□□□□ -1.75
HttP42859 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC4.1□□□□□ -1.75
HttP42859 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
HttP42859 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HttP42859 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
HttP42859 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
HttP42859 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
HttP42859 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
HttP42859 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
HttP42859 Gm12577-201ENSMUST00000119701 574 ntBASIC4.1□□□□□ -1.75
HttP42859 AC159622.1-201ENSMUST00000221004 554 ntBASIC4.1□□□□□ -1.75
HttP42859 CT485612.3-201ENSMUST00000222179 408 ntBASIC4.1□□□□□ -1.75
HttP42859 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HttP42859 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC4.1□□□□□ -1.75
HttP42859 AC122355.1-201ENSMUST00000228155 4184 ntBASIC4.1□□□□□ -1.75
HttP42859 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
HttP42859 Gm38207-201ENSMUST00000193009 3505 ntBASIC4.09□□□□□ -1.75
HttP42859 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HttP42859 Sim1-201ENSMUST00000020071 7355 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HttP42859 Gm13443-201ENSMUST00000120770 555 ntBASIC4.09□□□□□ -1.75
HttP42859 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC4.09□□□□□ -1.75
HttP42859 Gm25519-201ENSMUST00000158392 127 ntBASIC4.09□□□□□ -1.75
HttP42859 Gm25714-201ENSMUST00000158626 296 ntBASIC4.09□□□□□ -1.75
HttP42859 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC4.09□□□□□ -1.75
HttP42859 Gm37300-201ENSMUST00000193327 280 ntBASIC4.09□□□□□ -1.75
HttP42859 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HttP42859 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.09□□□□□ -1.75
HttP42859 AC153794.2-201ENSMUST00000222650 550 ntBASIC4.09□□□□□ -1.75
HttP42859 Muc4-201ENSMUST00000096106 11277 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
HttP42859 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HttP42859 AC163296.2-201ENSMUST00000220177 1315 ntBASIC4.09□□□□□ -1.75
HttP42859 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
HttP42859 Gm15553-201ENSMUST00000118757 430 ntBASIC4.09□□□□□ -1.75
HttP42859 Gm24936-201ENSMUST00000122598 247 ntBASIC4.09□□□□□ -1.75
HttP42859 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HttP42859 Dnah10-203ENSMUST00000141137 13862 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
HttP42859 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HttP42859 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
HttP42859 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
HttP42859 Gm45555-201ENSMUST00000210028 2602 ntBASIC4.09□□□□□ -1.76
HttP42859 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.76
HttP42859 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HttP42859 Gm16021-201ENSMUST00000121176 219 ntBASIC4.08□□□□□ -1.76
HttP42859 Gm22908-201ENSMUST00000177620 110 ntBASIC4.08□□□□□ -1.76
HttP42859 Gm7258-201ENSMUST00000179317 300 ntBASIC4.08□□□□□ -1.76
HttP42859 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC4.08□□□□□ -1.76
HttP42859 Gm10356-201ENSMUST00000097152 1258 ntBASIC4.08□□□□□ -1.76
HttP42859 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HttP42859 Med12l-204ENSMUST00000164225 10264 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
HttP42859 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HttP42859 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC4.08□□□□□ -1.76
HttP42859 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HttP42859 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HttP42859 Gm37370-201ENSMUST00000191996 1410 ntBASIC4.08□□□□□ -1.76
HttP42859 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HttP42859 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC4.08□□□□□ -1.76
HttP42859 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HttP42859 Gm11742-201ENSMUST00000119903 233 ntBASIC4.08□□□□□ -1.76
HttP42859 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HttP42859 Ctnnd1-219ENSMUST00000111693 6255 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
HttP42859 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HttP42859 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms