Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Mir6238-201ENSMUST00000184140 129 ntBASIC5.2□□□□□ -1.58
Traf1P39428 Gm22897-201ENSMUST00000197860 128 ntBASIC5.2□□□□□ -1.58
Traf1P39428 Gm17937-201ENSMUST00000197908 742 ntBASIC5.2□□□□□ -1.58
Traf1P39428 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC5.2□□□□□ -1.58
Traf1P39428 AC154241.1-201ENSMUST00000223952 356 ntBASIC5.2□□□□□ -1.58
Traf1P39428 AC154592.1-201ENSMUST00000225784 574 ntBASIC5.2□□□□□ -1.58
Traf1P39428 Diaph3-206ENSMUST00000226745 713 ntBASIC5.2□□□□□ -1.58
Traf1P39428 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Traf1P39428 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Traf1P39428 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Traf1P39428 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC5.2□□□□□ -1.58
Traf1P39428 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Traf1P39428 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Traf1P39428 Dbpht2-202ENSMUST00000221311 5341 ntBASIC5.2□□□□□ -1.58
Traf1P39428 Gm38104-201ENSMUST00000195121 1895 ntBASIC5.2□□□□□ -1.58
Traf1P39428 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Traf1P39428 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Traf1P39428 Gm32444-201ENSMUST00000195147 3511 ntBASIC5.19□□□□□ -1.58
Traf1P39428 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Traf1P39428 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Traf1P39428 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Traf1P39428 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Traf1P39428 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Traf1P39428 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Traf1P39428 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC5.19□□□□□ -1.58
Traf1P39428 Gm15058-201ENSMUST00000117689 458 ntBASIC5.19□□□□□ -1.58
Traf1P39428 Gm14172-201ENSMUST00000118255 644 ntBASIC5.19□□□□□ -1.58
Traf1P39428 Gm11719-201ENSMUST00000119399 351 ntBASIC5.19□□□□□ -1.58
Traf1P39428 Gm26347-201ENSMUST00000157526 131 ntBASIC5.19□□□□□ -1.58
Traf1P39428 Gm24224-201ENSMUST00000158828 258 ntBASIC5.19□□□□□ -1.58
Traf1P39428 Gm27834-201ENSMUST00000183427 125 ntBASIC5.19□□□□□ -1.58
Traf1P39428 Mir6899-201ENSMUST00000184798 64 ntBASIC5.19□□□□□ -1.58
Traf1P39428 Gm38330-201ENSMUST00000192743 959 ntBASIC5.19□□□□□ -1.58
Traf1P39428 Gm38150-201ENSMUST00000192996 452 ntBASIC5.19□□□□□ -1.58
Traf1P39428 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC5.19□□□□□ -1.58
Traf1P39428 Gm17951-201ENSMUST00000198536 496 ntBASIC5.19□□□□□ -1.58
Traf1P39428 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Traf1P39428 Gm44523-201ENSMUST00000205616 417 ntBASIC5.19□□□□□ -1.58
Traf1P39428 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC5.19□□□□□ -1.58
Traf1P39428 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Traf1P39428 Gm9616-201ENSMUST00000221154 781 ntBASIC5.19□□□□□ -1.58
Traf1P39428 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC5.19□□□□□ -1.58
Traf1P39428 Gm19786-201ENSMUST00000222589 580 ntBASIC5.19□□□□□ -1.58
Traf1P39428 AL645546.2-201ENSMUST00000224526 265 ntBASIC5.19□□□□□ -1.58
Traf1P39428 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Traf1P39428 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Traf1P39428 Gm23099-201ENSMUST00000083454 139 ntBASIC5.19□□□□□ -1.58
Traf1P39428 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC5.19□□□□□ -1.58
Traf1P39428 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Traf1P39428 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Traf1P39428 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Traf1P39428 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Traf1P39428 Gm37831-201ENSMUST00000191685 1787 ntBASIC5.19□□□□□ -1.58
Traf1P39428 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Traf1P39428 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Traf1P39428 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Traf1P39428 Gm3089-201ENSMUST00000200804 1395 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Gm3302-201ENSMUST00000201462 1395 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Ankrd28-204ENSMUST00000227089 3522 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Gm37718-201ENSMUST00000191655 2631 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Traf1P39428 Gm22493-201ENSMUST00000104494 132 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Gm12852-201ENSMUST00000119478 719 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Gm8051-201ENSMUST00000120464 466 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Gm14303-201ENSMUST00000121320 171 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Llph-ps2-201ENSMUST00000122000 393 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC5.18□□□□□ -1.58
Traf1P39428 Gm7846-201ENSMUST00000145844 274 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC5.18□□□□□ -1.58
Traf1P39428 Gm24939-201ENSMUST00000158325 137 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Traf1P39428 Gm25525-201ENSMUST00000177701 107 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Gm26178-201ENSMUST00000177706 107 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Gm15143-201ENSMUST00000178180 714 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Gm26465-201ENSMUST00000178517 107 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Gm24317-201ENSMUST00000178536 107 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Gm16378-201ENSMUST00000179168 342 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Gm25021-201ENSMUST00000179184 107 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Traf1P39428 Gm22995-201ENSMUST00000179670 107 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Gm24424-201ENSMUST00000179714 107 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Gm24389-201ENSMUST00000179962 107 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Gm25672-201ENSMUST00000180111 107 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Mir6960-201ENSMUST00000183449 61 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Gm29163-201ENSMUST00000188029 107 ntBASIC5.18□□□□□ -1.58
Traf1P39428 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC5.18□□□□□ -1.58
Traf1P39428 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC5.18□□□□□ -1.58
Traf1P39428 Gm43580-201ENSMUST00000202892 284 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Gm19131-201ENSMUST00000203408 789 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Gm45034-201ENSMUST00000206831 482 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Gm45209-201ENSMUST00000207122 353 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Gm17737-201ENSMUST00000210183 1147 ntBASIC5.18□□□□□ -1.58
Traf1P39428 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Traf1P39428 AC153516.1-201ENSMUST00000217955 779 ntBASIC5.18□□□□□ -1.58
Traf1P39428 Gm46190-201ENSMUST00000219650 427 ntBASIC5.18□□□□□ -1.58
Traf1P39428 CT009765.2-201ENSMUST00000221331 392 ntBASIC5.18□□□□□ -1.58
Traf1P39428 CT009713.4-201ENSMUST00000224246 272 ntBASIC5.18□□□□□ -1.58
Traf1P39428 AC174459.2-201ENSMUST00000226036 160 ntBASIC5.18□□□□□ -1.58
Traf1P39428 AC155167.1-201ENSMUST00000228931 614 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms