Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Lire1P11260 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC4.63□□□□□ -1.67
Lire1P11260 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Lire1P11260 Adgrg4-206ENSMUST00000168724 531 ntBASIC4.63□□□□□ -1.67
Lire1P11260 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC4.63□□□□□ -1.67
Lire1P11260 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC4.63□□□□□ -1.67
Lire1P11260 Mir3473c-201ENSMUST00000175262 81 ntBASIC4.63□□□□□ -1.67
Lire1P11260 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC4.63□□□□□ -1.67
Lire1P11260 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC4.63□□□□□ -1.67
Lire1P11260 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Lire1P11260 Gm26915-201ENSMUST00000183080 748 ntBASIC4.63□□□□□ -1.67
Lire1P11260 Gm27538-201ENSMUST00000185065 294 ntBASIC4.63□□□□□ -1.67
Lire1P11260 Gm28263-201ENSMUST00000185884 400 ntBASIC4.63□□□□□ -1.67
Lire1P11260 Gm18505-201ENSMUST00000187360 790 ntBASIC4.63□□□□□ -1.67
Lire1P11260 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Lire1P11260 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Lire1P11260 Gm18540-201ENSMUST00000204025 526 ntBASIC4.63□□□□□ -1.67
Lire1P11260 Gm43919-201ENSMUST00000204303 364 ntBASIC4.63□□□□□ -1.67
Lire1P11260 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC4.63□□□□□ -1.67
Lire1P11260 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC4.63□□□□□ -1.67
Lire1P11260 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Lire1P11260 AC154576.2-203ENSMUST00000224736 253 ntBASIC4.63□□□□□ -1.67
Lire1P11260 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
Lire1P11260 Gm10916-201ENSMUST00000080330 483 ntBASIC4.63□□□□□ -1.67
Lire1P11260 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC4.63□□□□□ -1.67
Lire1P11260 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Lire1P11260 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Lire1P11260 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC4.63□□□□□ -1.67
Lire1P11260 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Lire1P11260 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.63□□□□□ -1.67
Lire1P11260 AC122840.2-201ENSMUST00000221030 2659 ntBASIC4.63□□□□□ -1.67
Lire1P11260 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Lire1P11260 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Lire1P11260 AC154640.4-201ENSMUST00000226647 4640 ntBASIC4.63□□□□□ -1.67
Lire1P11260 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Lire1P11260 CT025710.1-201ENSMUST00000222949 2533 ntBASIC4.63□□□□□ -1.67
Lire1P11260 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Lire1P11260 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Lire1P11260 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Lire1P11260 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Lire1P11260 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Lire1P11260 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.62□□□□□ -1.67
Lire1P11260 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Lire1P11260 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Lire1P11260 Gm23948-201ENSMUST00000104030 132 ntBASIC4.62□□□□□ -1.67
Lire1P11260 Gm25097-201ENSMUST00000104042 145 ntBASIC4.62□□□□□ -1.67
Lire1P11260 Gm23593-201ENSMUST00000104309 120 ntBASIC4.62□□□□□ -1.67
Lire1P11260 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Lire1P11260 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC4.62□□□□□ -1.67
Lire1P11260 Gm11366-201ENSMUST00000119279 429 ntBASIC4.62□□□□□ -1.67
Lire1P11260 Gm13367-201ENSMUST00000119955 796 ntBASIC4.62□□□□□ -1.67
Lire1P11260 Gm1866-201ENSMUST00000120701 477 ntBASIC4.62□□□□□ -1.67
Lire1P11260 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Lire1P11260 Gm14505-201ENSMUST00000145383 831 ntTSL 3 BASIC4.62□□□□□ -1.67
Lire1P11260 Gm25271-201ENSMUST00000157273 290 ntBASIC4.62□□□□□ -1.67
Lire1P11260 Gm23993-201ENSMUST00000157478 144 ntBASIC4.62□□□□□ -1.67
Lire1P11260 Gm16147-201ENSMUST00000162143 373 ntBASIC4.62□□□□□ -1.67
Lire1P11260 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Lire1P11260 Gm24811-201ENSMUST00000175313 100 ntBASIC4.62□□□□□ -1.67
Lire1P11260 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC4.62□□□□□ -1.67
Lire1P11260 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Lire1P11260 V1rg10-201ENSMUST00000183378 937 ntBASIC4.62□□□□□ -1.67
Lire1P11260 Gm28594-201ENSMUST00000187022 661 ntBASIC4.62□□□□□ -1.67
Lire1P11260 Gm20203-201ENSMUST00000192352 332 ntBASIC4.62□□□□□ -1.67
Lire1P11260 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC4.62□□□□□ -1.67
Lire1P11260 Gm43524-201ENSMUST00000197278 298 ntBASIC4.62□□□□□ -1.67
Lire1P11260 Gm6064-201ENSMUST00000203999 454 ntBASIC4.62□□□□□ -1.67
Lire1P11260 Gm45317-201ENSMUST00000210385 223 ntBASIC4.62□□□□□ -1.67
Lire1P11260 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.62□□□□□ -1.67
Lire1P11260 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC4.62□□□□□ -1.67
Lire1P11260 AC164624.1-201ENSMUST00000219148 1025 ntTSL 5 BASIC4.62□□□□□ -1.67
Lire1P11260 Gm29774-201ENSMUST00000219270 436 ntBASIC4.62□□□□□ -1.67
Lire1P11260 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.62□□□□□ -1.67
Lire1P11260 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC4.62□□□□□ -1.67
Lire1P11260 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Lire1P11260 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Lire1P11260 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Lire1P11260 Olfr1200-201ENSMUST00000099811 1011 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Lire1P11260 Gm44078-201ENSMUST00000204652 2646 ntBASIC4.62□□□□□ -1.67
Lire1P11260 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
Lire1P11260 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.62□□□□□ -1.67
Lire1P11260 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Lire1P11260 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.62□□□□□ -1.67
Lire1P11260 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Lire1P11260 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Lire1P11260 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Lire1P11260 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.61□□□□□ -1.67
Lire1P11260 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Lire1P11260 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
Lire1P11260 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Lire1P11260 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Lire1P11260 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Lire1P11260 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Lire1P11260 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Lire1P11260 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Lire1P11260 Gm24350-201ENSMUST00000104163 133 ntBASIC4.61□□□□□ -1.67
Lire1P11260 Gm22899-201ENSMUST00000104540 131 ntBASIC4.61□□□□□ -1.67
Lire1P11260 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Lire1P11260 Gm7834-201ENSMUST00000117560 437 ntBASIC4.61□□□□□ -1.67
Lire1P11260 Gm12587-201ENSMUST00000120180 427 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms